Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.45□□□□□ -2.34
HSPG2P98160 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.45□□□□□ -2.34
HSPG2P98160 MIR5589-201ENST00000579442 60 ntBASIC0.45□□□□□ -2.34
HSPG2P98160 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.45□□□□□ -2.34
HSPG2P98160 AL355816.1-201ENST00000607951 118 ntBASIC0.45□□□□□ -2.34
HSPG2P98160 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
HSPG2P98160 CD24P4-201ENST00000382840 243 ntBASIC0.45□□□□□ -2.34
HSPG2P98160 MIR1265-201ENST00000408444 86 ntBASIC0.45□□□□□ -2.34
HSPG2P98160 RPL21P32-201ENST00000419877 477 ntBASIC0.45□□□□□ -2.34
HSPG2P98160 HMGB1P9-201ENST00000429856 646 ntBASIC0.45□□□□□ -2.34
HSPG2P98160 RPS29P28-201ENST00000446439 141 ntBASIC0.45□□□□□ -2.34
HSPG2P98160 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
HSPG2P98160 RPL30P5-201ENST00000494923 336 ntBASIC0.45□□□□□ -2.34
HSPG2P98160 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.45□□□□□ -2.34
HSPG2P98160 MIR3122-201ENST00000577243 73 ntBASIC0.45□□□□□ -2.34
HSPG2P98160 AC002550.2-201ENST00000621246 394 ntBASIC0.45□□□□□ -2.34
HSPG2P98160 RNU6-920P-201ENST00000410926 92 ntBASIC0.45□□□□□ -2.34
HSPG2P98160 Z99497.1-201ENST00000421282 135 ntBASIC0.45□□□□□ -2.34
HSPG2P98160 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.45□□□□□ -2.34
HSPG2P98160 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.45□□□□□ -2.34
HSPG2P98160 FAM206BP-201ENST00000510179 541 ntBASIC0.45□□□□□ -2.34
HSPG2P98160 AC023824.2-201ENST00000566185 400 ntBASIC0.45□□□□□ -2.34
HSPG2P98160 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.45□□□□□ -2.34
HSPG2P98160 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC0.45□□□□□ -2.34
HSPG2P98160 AC145207.9-201ENST00000623802 325 ntBASIC0.45□□□□□ -2.34
HSPG2P98160 Y_RNA.142-201ENST00000363491 102 ntBASIC0.44□□□□□ -2.34
HSPG2P98160 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.44□□□□□ -2.34
HSPG2P98160 AC005786.1-201ENST00000588553 154 ntBASIC0.44□□□□□ -2.34
HSPG2P98160 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.44□□□□□ -2.34
HSPG2P98160 RNA5SP347-201ENST00000362445 119 ntBASIC0.44□□□□□ -2.34
HSPG2P98160 AL161449.1-201ENST00000414531 1199 ntBASIC0.44□□□□□ -2.34
HSPG2P98160 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.44□□□□□ -2.34
HSPG2P98160 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.44□□□□□ -2.34
HSPG2P98160 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.44□□□□□ -2.34
HSPG2P98160 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.44□□□□□ -2.34
HSPG2P98160 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
HSPG2P98160 RNA5SP25-201ENST00000410815 110 ntBASIC0.44□□□□□ -2.34
HSPG2P98160 AL591704.2-201ENST00000421658 181 ntBASIC0.44□□□□□ -2.34
HSPG2P98160 AC244098.2-201ENST00000422068 99 ntBASIC0.44□□□□□ -2.34
HSPG2P98160 SNORA48.11-201ENST00000517015 89 ntBASIC0.44□□□□□ -2.34
HSPG2P98160 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.44□□□□□ -2.34
HSPG2P98160 MIR3117-201ENST00000584034 78 ntBASIC0.44□□□□□ -2.34
HSPG2P98160 AC096586.2-201ENST00000610260 441 ntBASIC0.44□□□□□ -2.34
HSPG2P98160 AL137003.2-201ENST00000606924 2538 ntBASIC0.44□□□□□ -2.34
HSPG2P98160 SNORA1.3-201ENST00000384676 136 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 AC004022.2-201ENST00000413824 193 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 AL591043.1-201ENST00000432461 424 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 CABYRP1-201ENST00000465493 1045 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.43□□□□□ -2.34
HSPG2P98160 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.43□□□□□ -2.34
HSPG2P98160 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
HSPG2P98160 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
HSPG2P98160 OR4G2P-201ENST00000328113 903 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 CIR1P3-201ENST00000405137 479 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.43□□□□□ -2.34
HSPG2P98160 TPT1P8-201ENST00000510120 555 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.43□□□□□ -2.34
HSPG2P98160 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.43□□□□□ -2.34
HSPG2P98160 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.43□□□□□ -2.34
HSPG2P98160 AC110079.1-202ENST00000635213 138 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 RPL23AP6-201ENST00000446637 472 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 PCNAP1-201ENST00000505363 709 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 AC096745.1-201ENST00000509945 370 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.43□□□□□ -2.34
HSPG2P98160 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.43□□□□□ -2.34
HSPG2P98160 MTND2P17-201ENST00000550281 688 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
HSPG2P98160 FAM106CP-201ENST00000582212 507 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 AC034236.3-201ENST00000605999 461 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 AP003485.1-201ENST00000625093 753 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.43□□□□□ -2.34
HSPG2P98160 SNORD95.1-201ENST00000364099 68 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 MIR934-201ENST00000401241 83 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 AL512604.1-201ENST00000404812 257 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.43□□□□□ -2.34
HSPG2P98160 AL356867.1-201ENST00000429623 299 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.43□□□□□ -2.34
HSPG2P98160 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.43□□□□□ -2.34
HSPG2P98160 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.43□□□□□ -2.34
HSPG2P98160 AC025423.2-201ENST00000537570 439 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 MIR3616-201ENST00000584070 92 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 AC008749.1-201ENST00000597650 306 ntBASIC0.43□□□□□ -2.34
HSPG2P98160 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
HSPG2P98160 RNU6-1181P-201ENST00000384191 106 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 MIR153-1-201ENST00000384914 90 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 RNU6-955P-201ENST00000410497 104 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 AC117503.1-201ENST00000472241 394 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 AC018437.1-201ENST00000492214 406 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
HSPG2P98160 RNU1-72P-201ENST00000362976 153 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 MIR1250-201ENST00000408098 113 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 AL035666.1-201ENST00000446195 348 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.42□□□□□ -2.34
HSPG2P98160 AC078857.1-201ENST00000469870 667 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
HSPG2P98160 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
HSPG2P98160 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
HSPG2P98160 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
HSPG2P98160 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms