Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TPM4P67936 RPL23AP6-201ENST00000446637 472 ntBASIC1.85□□□□□ -2.11
TPM4P67936 AC244505.3-201ENST00000454598 187 ntBASIC1.85□□□□□ -2.11
TPM4P67936 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.85□□□□□ -2.11
TPM4P67936 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.85□□□□□ -2.11
TPM4P67936 AL049873.1-201ENST00000480540 376 ntBASIC1.85□□□□□ -2.11
TPM4P67936 AC092902.1-201ENST00000486999 259 ntBASIC1.85□□□□□ -2.11
TPM4P67936 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.85□□□□□ -2.11
TPM4P67936 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TPM4P67936 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.85□□□□□ -2.11
TPM4P67936 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.85□□□□□ -2.11
TPM4P67936 AP001189.2-201ENST00000527320 189 ntBASIC1.85□□□□□ -2.11
TPM4P67936 AC084851.1-201ENST00000529105 249 ntBASIC1.85□□□□□ -2.11
TPM4P67936 AC021739.1-201ENST00000559631 174 ntBASIC1.85□□□□□ -2.11
TPM4P67936 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.85□□□□□ -2.11
TPM4P67936 AC004805.2-201ENST00000605382 482 ntBASIC1.85□□□□□ -2.11
TPM4P67936 AC022202.1-201ENST00000613515 211 ntBASIC1.85□□□□□ -2.11
TPM4P67936 AC107075.1-201ENST00000613695 314 ntBASIC1.85□□□□□ -2.11
TPM4P67936 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
TPM4P67936 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
TPM4P67936 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
TPM4P67936 MCTS2P-201ENST00000394552 546 ntBASIC1.84□□□□□ -2.11
TPM4P67936 SNORA11-201ENST00000408789 128 ntBASIC1.84□□□□□ -2.11
TPM4P67936 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.84□□□□□ -2.11
TPM4P67936 HMGN2P10-201ENST00000448085 265 ntBASIC1.84□□□□□ -2.11
TPM4P67936 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.84□□□□□ -2.11
TPM4P67936 AC005410.1-202ENST00000460347 485 ntBASIC1.84□□□□□ -2.11
TPM4P67936 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.84□□□□□ -2.11
TPM4P67936 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.84□□□□□ -2.11
TPM4P67936 RNA5SP290-201ENST00000517133 127 ntBASIC1.84□□□□□ -2.11
TPM4P67936 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.84□□□□□ -2.11
TPM4P67936 DUXAP1-201ENST00000556632 463 ntBASIC1.84□□□□□ -2.11
TPM4P67936 AC138915.2-201ENST00000569776 97 ntBASIC1.84□□□□□ -2.11
TPM4P67936 UBE2L4-201ENST00000587688 464 ntBASIC1.84□□□□□ -2.11
TPM4P67936 AC010133.1-201ENST00000615809 842 ntBASIC1.84□□□□□ -2.11
TPM4P67936 MKKS-204ENST00000639674 192 ntBASIC1.84□□□□□ -2.11
TPM4P67936 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.84□□□□□ -2.12
TPM4P67936 U8.3-201ENST00000363321 132 ntBASIC1.83□□□□□ -2.12
TPM4P67936 Y_RNA.234-201ENST00000364409 97 ntBASIC1.83□□□□□ -2.12
TPM4P67936 U6.112-201ENST00000384129 70 ntBASIC1.83□□□□□ -2.12
TPM4P67936 SNORA3.2-201ENST00000408221 125 ntBASIC1.83□□□□□ -2.12
TPM4P67936 RN7SKP192-201ENST00000411291 327 ntBASIC1.83□□□□□ -2.12
TPM4P67936 RNA5SP508-201ENST00000411327 119 ntBASIC1.83□□□□□ -2.12
TPM4P67936 RNU6-516P-201ENST00000411381 104 ntBASIC1.83□□□□□ -2.12
TPM4P67936 AC007435.1-201ENST00000421086 415 ntBASIC1.83□□□□□ -2.12
TPM4P67936 AC244636.1-201ENST00000421152 228 ntBASIC1.83□□□□□ -2.12
TPM4P67936 AL161651.1-201ENST00000440882 223 ntBASIC1.83□□□□□ -2.12
TPM4P67936 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.83□□□□□ -2.12
TPM4P67936 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.83□□□□□ -2.12
TPM4P67936 AC104685.1-201ENST00000502445 371 ntBASIC1.83□□□□□ -2.12
TPM4P67936 AC006199.1-201ENST00000548728 219 ntBASIC1.83□□□□□ -2.12
TPM4P67936 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.83□□□□□ -2.12
TPM4P67936 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.83□□□□□ -2.12
TPM4P67936 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.83□□□□□ -2.12
TPM4P67936 MIR3167-201ENST00000579623 85 ntBASIC1.83□□□□□ -2.12
TPM4P67936 AL031274.2-201ENST00000599419 203 ntBASIC1.83□□□□□ -2.12
TPM4P67936 AL078605.1-201ENST00000603529 500 ntBASIC1.83□□□□□ -2.12
TPM4P67936 AC100814.1-201ENST00000606963 623 ntBASIC1.83□□□□□ -2.12
TPM4P67936 AC253576.2-201ENST00000618815 580 ntBASIC1.83□□□□□ -2.12
TPM4P67936 RNU6-216P-201ENST00000363282 104 ntBASIC1.82□□□□□ -2.12
TPM4P67936 RNU6-1078P-201ENST00000364522 103 ntBASIC1.82□□□□□ -2.12
TPM4P67936 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
TPM4P67936 UBE2V1P15-201ENST00000407776 448 ntBASIC1.82□□□□□ -2.12
TPM4P67936 PTGES3P2-201ENST00000407942 482 ntBASIC1.82□□□□□ -2.12
TPM4P67936 RN7SKP101-201ENST00000411376 320 ntBASIC1.82□□□□□ -2.12
TPM4P67936 POLHP1-201ENST00000411806 470 ntBASIC1.82□□□□□ -2.12
TPM4P67936 AL161449.1-201ENST00000414531 1199 ntBASIC1.82□□□□□ -2.12
TPM4P67936 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TPM4P67936 AL353729.1-201ENST00000425044 720 ntBASIC1.82□□□□□ -2.12
TPM4P67936 ELOCP14-201ENST00000428070 331 ntBASIC1.82□□□□□ -2.12
TPM4P67936 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.82□□□□□ -2.12
TPM4P67936 HSPE1P21-201ENST00000438283 308 ntBASIC1.82□□□□□ -2.12
TPM4P67936 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.82□□□□□ -2.12
TPM4P67936 PTGES3P1-201ENST00000439531 483 ntBASIC1.82□□□□□ -2.12
TPM4P67936 ELOCP7-201ENST00000439968 331 ntBASIC1.82□□□□□ -2.12
TPM4P67936 AC093155.1-201ENST00000440164 826 ntBASIC1.82□□□□□ -2.12
TPM4P67936 RPL7P36-201ENST00000444633 681 ntBASIC1.82□□□□□ -2.12
TPM4P67936 AL360221.1-201ENST00000445989 335 ntBASIC1.82□□□□□ -2.12
TPM4P67936 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TPM4P67936 MRPL42P4-201ENST00000453267 443 ntBASIC1.82□□□□□ -2.12
TPM4P67936 AP001324.2-201ENST00000461163 319 ntBASIC1.82□□□□□ -2.12
TPM4P67936 AC023790.1-201ENST00000482174 347 ntBASIC1.82□□□□□ -2.12
TPM4P67936 HMGB1P35-201ENST00000503360 598 ntBASIC1.82□□□□□ -2.12
TPM4P67936 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.82□□□□□ -2.12
TPM4P67936 AC044913.1-201ENST00000557200 430 ntBASIC1.82□□□□□ -2.12
TPM4P67936 NRBF2P1-201ENST00000587407 859 ntBASIC1.82□□□□□ -2.12
TPM4P67936 AC068944.2-201ENST00000610373 403 ntBASIC1.82□□□□□ -2.12
TPM4P67936 AC010975.3-201ENST00000618727 978 ntBASIC1.82□□□□□ -2.12
TPM4P67936 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TPM4P67936 ADAM3A-203ENST00000461344 2157 ntBASIC1.82□□□□□ -2.12
TPM4P67936 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TPM4P67936 RNA5SP240-201ENST00000365355 128 ntBASIC1.81□□□□□ -2.12
TPM4P67936 DEFB130D-201ENST00000426866 237 ntBASIC1.81□□□□□ -2.12
TPM4P67936 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.81□□□□□ -2.12
TPM4P67936 MTCYBP15-201ENST00000433123 1127 ntBASIC1.81□□□□□ -2.12
TPM4P67936 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.81□□□□□ -2.12
TPM4P67936 RPL7P54-201ENST00000438336 674 ntBASIC1.81□□□□□ -2.12
TPM4P67936 MTND6P13-201ENST00000443510 523 ntBASIC1.81□□□□□ -2.12
TPM4P67936 SEPT14P24-201ENST00000447236 180 ntBASIC1.81□□□□□ -2.12
TPM4P67936 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms