Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 HMGB3P26-201ENST00000560051 582 ntBASIC4.4□□□□□ -1.71
NCKAP1LP55160 MIR3160-1-201ENST00000577972 85 ntBASIC4.4□□□□□ -1.71
NCKAP1LP55160 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NCKAP1LP55160 AC016727.2-201ENST00000603988 621 ntBASIC4.4□□□□□ -1.71
NCKAP1LP55160 AC012603.1-201ENST00000606424 528 ntBASIC4.4□□□□□ -1.71
NCKAP1LP55160 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.4□□□□□ -1.71
NCKAP1LP55160 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.4□□□□□ -1.71
NCKAP1LP55160 BMS1P21-201ENST00000634565 365 ntBASIC4.4□□□□□ -1.71
NCKAP1LP55160 AC026951.1-201ENST00000559530 2459 ntBASIC4.4□□□□□ -1.71
NCKAP1LP55160 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.71
NCKAP1LP55160 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
NCKAP1LP55160 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NCKAP1LP55160 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NCKAP1LP55160 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
NCKAP1LP55160 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NCKAP1LP55160 AC018529.3-201ENST00000624212 2254 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NCKAP1LP55160 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
NCKAP1LP55160 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.39□□□□□ -1.71
NCKAP1LP55160 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NCKAP1LP55160 RNA5SP283-201ENST00000365604 119 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NCKAP1LP55160 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NCKAP1LP55160 Y_RNA.512-201ENST00000384518 102 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 RN7SKP159-201ENST00000410657 292 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 RNU6-55P-201ENST00000411092 107 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 USP9YP30-201ENST00000430729 455 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 AL591704.1-201ENST00000432574 275 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 AC010655.1-201ENST00000449336 292 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 AC087884.1-201ENST00000469738 328 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 RPL23AP2-201ENST00000471227 466 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.39□□□□□ -1.71
NCKAP1LP55160 RPL31P61-201ENST00000496160 376 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 SLC25A15P5-201ENST00000508033 253 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 MTCO3P44-201ENST00000510977 541 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 TBCAP3-201ENST00000512475 312 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 FTH1P9-201ENST00000513251 355 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 RNU6-120P-201ENST00000516077 103 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NCKAP1LP55160 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.39□□□□□ -1.71
NCKAP1LP55160 SUB1P3-201ENST00000564581 315 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.39□□□□□ -1.71
NCKAP1LP55160 AC005899.2-201ENST00000584353 90 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.39□□□□□ -1.71
NCKAP1LP55160 AL161423.1-201ENST00000613700 262 ntBASIC4.39□□□□□ -1.71
NCKAP1LP55160 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NCKAP1LP55160 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.39□□□□□ -1.71
NCKAP1LP55160 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.39□□□□□ -1.71
NCKAP1LP55160 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NCKAP1LP55160 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NCKAP1LP55160 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NCKAP1LP55160 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NCKAP1LP55160 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
NCKAP1LP55160 Y_RNA.152-201ENST00000363578 100 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 RNA5SP515-201ENST00000364570 118 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 RNU6-715P-201ENST00000365204 103 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NCKAP1LP55160 RNU6-209P-201ENST00000384118 107 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 RPL21P1-201ENST00000399532 476 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 MIR1251-201ENST00000408552 70 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 MIR1252-201ENST00000408861 65 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 RPL21P24-201ENST00000413752 448 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.38□□□□□ -1.71
NCKAP1LP55160 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.38□□□□□ -1.71
NCKAP1LP55160 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.38□□□□□ -1.71
NCKAP1LP55160 AL645568.3-201ENST00000433683 316 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.38□□□□□ -1.71
NCKAP1LP55160 AC099799.1-201ENST00000439809 192 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 AL359672.1-201ENST00000442302 409 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 IFNWP4-201ENST00000453148 294 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.38□□□□□ -1.71
NCKAP1LP55160 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.38□□□□□ -1.71
NCKAP1LP55160 HMGB3P30-201ENST00000457863 606 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.38□□□□□ -1.71
NCKAP1LP55160 RNU6-307P-201ENST00000516743 106 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.38□□□□□ -1.71
NCKAP1LP55160 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.38□□□□□ -1.71
NCKAP1LP55160 RPL23AP84-201ENST00000571193 464 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 AC174048.1-201ENST00000603389 144 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 Z98751.3-201ENST00000604447 521 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 MTCO1P24-201ENST00000515438 1558 ntBASIC4.38□□□□□ -1.71
NCKAP1LP55160 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
NCKAP1LP55160 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NCKAP1LP55160 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NCKAP1LP55160 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.38□□□□□ -1.71
NCKAP1LP55160 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NCKAP1LP55160 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.37□□□□□ -1.71
NCKAP1LP55160 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.37□□□□□ -1.71
NCKAP1LP55160 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.37□□□□□ -1.71
NCKAP1LP55160 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.37□□□□□ -1.71
NCKAP1LP55160 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.37□□□□□ -1.71
NCKAP1LP55160 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NCKAP1LP55160 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.37□□□□□ -1.71
NCKAP1LP55160 RN7SKP227-201ENST00000364445 330 ntBASIC4.37□□□□□ -1.71
NCKAP1LP55160 RNU6-450P-201ENST00000364654 107 ntBASIC4.37□□□□□ -1.71
NCKAP1LP55160 Y_RNA.485-201ENST00000384395 102 ntBASIC4.37□□□□□ -1.71
NCKAP1LP55160 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.37□□□□□ -1.71
NCKAP1LP55160 PGBD4P6-201ENST00000421501 610 ntBASIC4.37□□□□□ -1.71
NCKAP1LP55160 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms