Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SNORA31.22-201ENST00000517204 135 ntBASIC2.74□□□□□ -1.97
HMGCS2P54868 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.74□□□□□ -1.97
HMGCS2P54868 MTND4LP18-201ENST00000526864 291 ntBASIC2.74□□□□□ -1.97
HMGCS2P54868 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.74□□□□□ -1.97
HMGCS2P54868 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.74□□□□□ -1.97
HMGCS2P54868 AC007115.1-201ENST00000546853 234 ntBASIC2.74□□□□□ -1.97
HMGCS2P54868 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.74□□□□□ -1.97
HMGCS2P54868 SETP2-201ENST00000553886 926 ntBASIC2.74□□□□□ -1.97
HMGCS2P54868 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.74□□□□□ -1.97
HMGCS2P54868 TPMTP1-201ENST00000592307 737 ntBASIC2.74□□□□□ -1.97
HMGCS2P54868 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.74□□□□□ -1.97
HMGCS2P54868 AC138749.5-201ENST00000611461 208 ntBASIC2.74□□□□□ -1.97
HMGCS2P54868 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.74□□□□□ -1.97
HMGCS2P54868 AL158063.1-201ENST00000615349 536 ntBASIC2.74□□□□□ -1.97
HMGCS2P54868 AC009090.3-201ENST00000616553 565 ntBASIC2.74□□□□□ -1.97
HMGCS2P54868 AC116165.2-201ENST00000616705 206 ntBASIC2.74□□□□□ -1.97
HMGCS2P54868 AC009159.1-201ENST00000618386 642 ntBASIC2.74□□□□□ -1.97
HMGCS2P54868 MIR6130-201ENST00000619419 109 ntBASIC2.74□□□□□ -1.97
HMGCS2P54868 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.74□□□□□ -1.97
HMGCS2P54868 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.73□□□□□ -1.97
HMGCS2P54868 RNY4P24-201ENST00000362735 96 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 RNU6-533P-201ENST00000384144 107 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 Y_RNA.608-201ENST00000410647 95 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 RN7SKP123-201ENST00000410732 291 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 RPL17P12-201ENST00000413391 526 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.73□□□□□ -1.97
HMGCS2P54868 CCDC58P2-201ENST00000417131 366 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 USP9YP13-201ENST00000417797 480 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 PPP1R11P2-201ENST00000423543 382 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 MTCO2P16-201ENST00000436962 677 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 RPS12P2-201ENST00000439728 269 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 COX6CP2-201ENST00000444980 225 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 AC009961.3-201ENST00000449832 765 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 AL590365.1-201ENST00000450788 243 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 MTND1P9-201ENST00000453775 944 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 RPS29P12-201ENST00000460178 152 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 RPL23AP11-201ENST00000475260 469 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.73□□□□□ -1.97
HMGCS2P54868 AC022483.1-201ENST00000514020 567 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.73□□□□□ -1.97
HMGCS2P54868 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HMGCS2P54868 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HMGCS2P54868 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.73□□□□□ -1.97
HMGCS2P54868 AC108747.1-201ENST00000609508 535 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.73□□□□□ -1.97
HMGCS2P54868 AC025594.3-201ENST00000613068 790 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 AC092140.2-201ENST00000618027 521 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 MIR6873-201ENST00000622788 63 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 AL138713.1-201ENST00000624026 2130 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 AL603839.4-201ENST00000624658 1005 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 AC025048.6-202ENST00000627667 438 ntBASIC2.73□□□□□ -1.97
HMGCS2P54868 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.73□□□□□ -1.97
HMGCS2P54868 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
HMGCS2P54868 SNORD21-201ENST00000383953 95 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 RNU6-637P-201ENST00000384050 107 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 SNORA41-201ENST00000384675 132 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
HMGCS2P54868 RNU6-754P-201ENST00000391166 107 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 AL079342.1-201ENST00000401460 267 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 MIR1290-201ENST00000408735 78 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 MTND1P21-201ENST00000412991 285 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 SEPT2P1-201ENST00000419651 180 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGCS2P54868 HMGN2P3-201ENST00000433603 273 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 AC024082.2-201ENST00000434771 238 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 HMGN2P5-201ENST00000436882 273 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 AL031667.1-201ENST00000440222 725 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGCS2P54868 SNRPGP9-201ENST00000456025 225 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 AL359385.1-201ENST00000456509 365 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 RPL31P3-201ENST00000458430 332 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 snoU13.23-201ENST00000458863 104 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 AC135721.1-201ENST00000497954 479 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HMGCS2P54868 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.72□□□□□ -1.97
HMGCS2P54868 AC109464.2-201ENST00000510242 943 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 MTND5P13-201ENST00000513046 1079 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.72□□□□□ -1.97
HMGCS2P54868 SNORA70.16-201ENST00000516390 95 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 RNU6-201P-201ENST00000517100 61 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGCS2P54868 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGCS2P54868 RANP3-201ENST00000530970 276 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 AP003122.4-201ENST00000530980 758 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 AC091564.4-201ENST00000533934 2194 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 AC123904.2-201ENST00000548059 300 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGCS2P54868 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.72□□□□□ -1.97
HMGCS2P54868 GLUD1P4-201ENST00000590914 418 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 AC119751.7-201ENST00000600494 245 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 DUXAP4-201ENST00000603046 613 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 NUTF2P8-201ENST00000604593 363 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 AC245008.1-201ENST00000608123 476 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 OR10AB1P-201ENST00000609613 938 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 AC004696.1-201ENST00000614345 607 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 AC112204.3-201ENST00000623822 332 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 AP003399.1-201ENST00000637534 361 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 AC099654.13-201ENST00000639774 207 ntBASIC2.72□□□□□ -1.97
HMGCS2P54868 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
HMGCS2P54868 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms