Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.74□□□□□ -1.81
COPAP53621 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.74□□□□□ -1.81
COPAP53621 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.74□□□□□ -1.81
COPAP53621 AC004801.2-202ENST00000463559 283 ntBASIC3.74□□□□□ -1.81
COPAP53621 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.74□□□□□ -1.81
COPAP53621 AC104806.1-201ENST00000508720 308 ntBASIC3.74□□□□□ -1.81
COPAP53621 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.74□□□□□ -1.81
COPAP53621 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.74□□□□□ -1.81
COPAP53621 SNORA31.3-201ENST00000516029 96 ntBASIC3.74□□□□□ -1.81
COPAP53621 SNORD60.2-201ENST00000516883 86 ntBASIC3.74□□□□□ -1.81
COPAP53621 RANP9-201ENST00000519957 271 ntBASIC3.74□□□□□ -1.81
COPAP53621 AC004024.1-201ENST00000549244 247 ntBASIC3.74□□□□□ -1.81
COPAP53621 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.74□□□□□ -1.81
COPAP53621 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
COPAP53621 AC174048.1-201ENST00000603389 144 ntBASIC3.74□□□□□ -1.81
COPAP53621 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.74□□□□□ -1.81
COPAP53621 AC090132.2-201ENST00000615881 347 ntBASIC3.74□□□□□ -1.81
COPAP53621 uc_338.11-201ENST00000619132 160 ntBASIC3.74□□□□□ -1.81
COPAP53621 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.74□□□□□ -1.81
COPAP53621 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.74□□□□□ -1.81
COPAP53621 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COPAP53621 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COPAP53621 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.74□□□□□ -1.81
COPAP53621 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
COPAP53621 MTCO1P12-201ENST00000414273 1543 ntBASIC3.74□□□□□ -1.81
COPAP53621 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.74□□□□□ -1.81
COPAP53621 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COPAP53621 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COPAP53621 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.73□□□□□ -1.81
COPAP53621 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COPAP53621 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COPAP53621 SNORD115-7-201ENST00000365306 82 ntBASIC3.73□□□□□ -1.81
COPAP53621 RNU6-14P-201ENST00000384630 106 ntBASIC3.73□□□□□ -1.81
COPAP53621 Y_RNA.576-201ENST00000384781 102 ntBASIC3.73□□□□□ -1.81
COPAP53621 MIR218-2-201ENST00000385006 110 ntBASIC3.73□□□□□ -1.81
COPAP53621 MT-TL1-201ENST00000386347 75 ntBASIC3.73□□□□□ -1.81
COPAP53621 RNA5SP424-201ENST00000390988 115 ntBASIC3.73□□□□□ -1.81
COPAP53621 RNU6-817P-201ENST00000391083 104 ntBASIC3.73□□□□□ -1.81
COPAP53621 AC138393.2-201ENST00000414742 246 ntBASIC3.73□□□□□ -1.81
COPAP53621 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.73□□□□□ -1.81
COPAP53621 RPL30P16-201ENST00000419341 429 ntBASIC3.73□□□□□ -1.81
COPAP53621 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.73□□□□□ -1.81
COPAP53621 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.73□□□□□ -1.81
COPAP53621 MTCYBP8-201ENST00000422855 651 ntBASIC3.73□□□□□ -1.81
COPAP53621 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.73□□□□□ -1.81
COPAP53621 RPL21P40-201ENST00000428586 483 ntBASIC3.73□□□□□ -1.81
COPAP53621 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.73□□□□□ -1.81
COPAP53621 RPL21P23-201ENST00000446654 460 ntBASIC3.73□□□□□ -1.81
COPAP53621 AC073415.1-201ENST00000449240 153 ntBASIC3.73□□□□□ -1.81
COPAP53621 AL162395.1-201ENST00000457882 422 ntBASIC3.73□□□□□ -1.81
COPAP53621 MTND4LP22-201ENST00000508209 276 ntBASIC3.73□□□□□ -1.81
COPAP53621 Y_RNA.689-201ENST00000516589 107 ntBASIC3.73□□□□□ -1.81
COPAP53621 RNU6-1231P-201ENST00000517185 103 ntBASIC3.73□□□□□ -1.81
COPAP53621 AF235103.2-201ENST00000525753 346 ntBASIC3.73□□□□□ -1.81
COPAP53621 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COPAP53621 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.73□□□□□ -1.81
COPAP53621 ADI1P3-201ENST00000549509 470 ntBASIC3.73□□□□□ -1.81
COPAP53621 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.73□□□□□ -1.81
COPAP53621 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.73□□□□□ -1.81
COPAP53621 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.73□□□□□ -1.81
COPAP53621 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.73□□□□□ -1.81
COPAP53621 AC096577.2-201ENST00000611455 153 ntBASIC3.73□□□□□ -1.81
COPAP53621 AC012409.4-201ENST00000612923 249 ntBASIC3.73□□□□□ -1.81
COPAP53621 MIR7975-201ENST00000619350 68 ntBASIC3.73□□□□□ -1.81
COPAP53621 AC011155.2-201ENST00000623202 216 ntBASIC3.73□□□□□ -1.81
COPAP53621 AC024614.3-201ENST00000637860 256 ntBASIC3.73□□□□□ -1.81
COPAP53621 ZNF826P-207ENST00000622273 1910 ntBASIC3.73□□□□□ -1.81
COPAP53621 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.73□□□□□ -1.81
COPAP53621 AL049781.1-201ENST00000623195 3585 ntBASIC3.73□□□□□ -1.81
COPAP53621 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.73□□□□□ -1.81
COPAP53621 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
COPAP53621 CUL1P1-201ENST00000509510 2425 ntBASIC3.72□□□□□ -1.81
COPAP53621 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
COPAP53621 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.72□□□□□ -1.81
COPAP53621 RNU6-1287P-201ENST00000362914 107 ntBASIC3.72□□□□□ -1.81
COPAP53621 SNORA72.1-201ENST00000363485 129 ntBASIC3.72□□□□□ -1.81
COPAP53621 RNU6-283P-201ENST00000364788 107 ntBASIC3.72□□□□□ -1.81
COPAP53621 RNU6-1060P-201ENST00000384664 107 ntBASIC3.72□□□□□ -1.81
COPAP53621 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
COPAP53621 SNORA48.8-201ENST00000391324 134 ntBASIC3.72□□□□□ -1.81
COPAP53621 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.72□□□□□ -1.81
COPAP53621 RNU6-373P-201ENST00000411247 98 ntBASIC3.72□□□□□ -1.81
COPAP53621 RNU6-387P-201ENST00000411331 105 ntBASIC3.72□□□□□ -1.81
COPAP53621 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COPAP53621 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.72□□□□□ -1.81
COPAP53621 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.72□□□□□ -1.81
COPAP53621 AC245054.1-201ENST00000420944 258 ntBASIC3.72□□□□□ -1.81
COPAP53621 AC007919.1-201ENST00000429380 217 ntBASIC3.72□□□□□ -1.81
COPAP53621 CYCSP4-201ENST00000429682 331 ntBASIC3.72□□□□□ -1.81
COPAP53621 RPL23AP83-201ENST00000434984 473 ntBASIC3.72□□□□□ -1.81
COPAP53621 CBWD4P-201ENST00000445695 655 ntBASIC3.72□□□□□ -1.81
COPAP53621 SNORD105B-201ENST00000458770 79 ntBASIC3.72□□□□□ -1.81
COPAP53621 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.72□□□□□ -1.81
COPAP53621 AC018710.1-201ENST00000506509 158 ntBASIC3.72□□□□□ -1.81
COPAP53621 AC026784.1-201ENST00000507986 352 ntBASIC3.72□□□□□ -1.81
COPAP53621 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.72□□□□□ -1.81
COPAP53621 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.72□□□□□ -1.81
COPAP53621 RNU6-123P-201ENST00000516163 102 ntBASIC3.72□□□□□ -1.81
COPAP53621 RANP3-201ENST00000530970 276 ntBASIC3.72□□□□□ -1.81
COPAP53621 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms