Protein–RNA interactions for Protein: P53420

COL4A4, Collagen alpha-4(IV) chain, humanhuman

Predicted RBP Predictions only

Length 1,690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4P53420 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.41□□□□□ -2.02
COL4A4P53420 AC007742.1-201ENST00000425789 329 ntBASIC2.41□□□□□ -2.02
COL4A4P53420 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.41□□□□□ -2.02
COL4A4P53420 ELOCP26-201ENST00000436067 329 ntBASIC2.41□□□□□ -2.02
COL4A4P53420 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
COL4A4P53420 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.41□□□□□ -2.02
COL4A4P53420 UBE2V1P5-201ENST00000440070 405 ntBASIC2.41□□□□□ -2.02
COL4A4P53420 PGBD4P3-201ENST00000440731 581 ntBASIC2.41□□□□□ -2.02
COL4A4P53420 RPL23AP76-201ENST00000441860 458 ntBASIC2.41□□□□□ -2.02
COL4A4P53420 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.41□□□□□ -2.02
COL4A4P53420 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.41□□□□□ -2.02
COL4A4P53420 AL035551.1-201ENST00000446931 348 ntBASIC2.41□□□□□ -2.02
COL4A4P53420 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.41□□□□□ -2.02
COL4A4P53420 RBM43P1-201ENST00000476891 1081 ntBASIC2.41□□□□□ -2.02
COL4A4P53420 LARP1BP2-201ENST00000486594 519 ntBASIC2.41□□□□□ -2.02
COL4A4P53420 AC107398.1-201ENST00000486904 505 ntBASIC2.41□□□□□ -2.02
COL4A4P53420 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.41□□□□□ -2.02
COL4A4P53420 AC083923.1-201ENST00000523708 376 ntBASIC2.41□□□□□ -2.02
COL4A4P53420 BPTFP1-201ENST00000579209 492 ntBASIC2.41□□□□□ -2.02
COL4A4P53420 SNORD39.2-201ENST00000579995 76 ntBASIC2.41□□□□□ -2.02
COL4A4P53420 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.41□□□□□ -2.02
COL4A4P53420 SEPT7P9-203ENST00000604116 343 ntBASIC2.41□□□□□ -2.02
COL4A4P53420 AP004247.3-201ENST00000608682 624 ntBASIC2.41□□□□□ -2.02
COL4A4P53420 AC091834.1-201ENST00000614543 472 ntBASIC2.41□□□□□ -2.02
COL4A4P53420 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.41□□□□□ -2.02
COL4A4P53420 MIR3688-2-201ENST00000636963 87 ntBASIC2.41□□□□□ -2.02
COL4A4P53420 AL109809.4-201ENST00000603520 2185 ntBASIC2.41□□□□□ -2.02
COL4A4P53420 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.4□□□□□ -2.02
COL4A4P53420 DCAF13P1-201ENST00000495256 1330 ntBASIC2.4□□□□□ -2.02
COL4A4P53420 SEC63P2-201ENST00000503863 1939 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.4□□□□□ -2.03
COL4A4P53420 AC006026.1-201ENST00000444025 1803 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 AL356292.1-201ENST00000283110 373 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 RNU1-17P-201ENST00000363022 152 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 RNU4-73P-201ENST00000363164 141 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
COL4A4P53420 AL356057.2-201ENST00000403318 432 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 Y_RNA.598-201ENST00000410480 95 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.4□□□□□ -2.03
COL4A4P53420 LINC01347-201ENST00000417964 355 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.4□□□□□ -2.03
COL4A4P53420 OFD1P18Y-201ENST00000420889 959 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 AL353729.1-201ENST00000425044 720 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.4□□□□□ -2.03
COL4A4P53420 AL365184.2-201ENST00000431139 435 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 RPS24P8-201ENST00000431490 402 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 PSPHP1-201ENST00000450062 261 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.4□□□□□ -2.03
COL4A4P53420 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.4□□□□□ -2.03
COL4A4P53420 AP000852.1-201ENST00000472460 573 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 MTCO3P9-201ENST00000506989 781 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 AC104108.1-201ENST00000509930 412 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 AC022483.1-201ENST00000514020 567 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 RNU6-826P-201ENST00000516827 104 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 SNORA20.3-201ENST00000516880 132 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 AC087808.1-201ENST00000520501 361 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 ARL2BPP5-201ENST00000523141 481 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 OR5AQ1P-201ENST00000527596 927 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.4□□□□□ -2.03
COL4A4P53420 GNAI2P1-201ENST00000541815 315 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.4□□□□□ -2.03
COL4A4P53420 AC008083.2-201ENST00000546707 476 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.4□□□□□ -2.03
COL4A4P53420 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.4□□□□□ -2.03
COL4A4P53420 MIR3913-1-201ENST00000577744 102 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.4□□□□□ -2.03
COL4A4P53420 AC104458.1-201ENST00000608243 463 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 AC103710.1-201ENST00000610003 901 ntBASIC2.4□□□□□ -2.03
COL4A4P53420 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.39□□□□□ -2.03
COL4A4P53420 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL4A4P53420 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.39□□□□□ -2.03
COL4A4P53420 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.39□□□□□ -2.03
COL4A4P53420 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL4A4P53420 RNU6-374P-201ENST00000364146 108 ntBASIC2.39□□□□□ -2.03
COL4A4P53420 SNORA40.3-201ENST00000390964 122 ntBASIC2.39□□□□□ -2.03
COL4A4P53420 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
COL4A4P53420 RPL31P54-201ENST00000429803 370 ntBASIC2.39□□□□□ -2.03
COL4A4P53420 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.39□□□□□ -2.03
COL4A4P53420 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.39□□□□□ -2.03
COL4A4P53420 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.39□□□□□ -2.03
COL4A4P53420 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.39□□□□□ -2.03
COL4A4P53420 AC104850.1-201ENST00000435940 476 ntBASIC2.39□□□□□ -2.03
COL4A4P53420 CR769767.1-201ENST00000436337 346 ntBASIC2.39□□□□□ -2.03
COL4A4P53420 AC093019.1-201ENST00000443135 252 ntBASIC2.39□□□□□ -2.03
COL4A4P53420 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.39□□□□□ -2.03
COL4A4P53420 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.39□□□□□ -2.03
COL4A4P53420 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.39□□□□□ -2.03
COL4A4P53420 MTCO2P4-201ENST00000517968 247 ntBASIC2.39□□□□□ -2.03
COL4A4P53420 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.39□□□□□ -2.03
COL4A4P53420 AC060766.3-201ENST00000591442 263 ntBASIC2.39□□□□□ -2.03
COL4A4P53420 DUXAP4-201ENST00000603046 613 ntBASIC2.39□□□□□ -2.03
COL4A4P53420 MTCO2P22-201ENST00000603246 681 ntBASIC2.39□□□□□ -2.03
COL4A4P53420 AP000942.4-201ENST00000604811 241 ntBASIC2.39□□□□□ -2.03
COL4A4P53420 RNU6-88P-201ENST00000606801 100 ntBASIC2.39□□□□□ -2.03
COL4A4P53420 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.39□□□□□ -2.03
COL4A4P53420 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
COL4A4P53420 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL4A4P53420 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
COL4A4P53420 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms