Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MTND5P30-201ENST00000452896 1731 ntBASIC1.31□□□□□ -2.2
SRP9P49458 ZNF72P-201ENST00000425869 1908 ntBASIC1.3□□□□□ -2.2
SRP9P49458 AC010889.1-201ENST00000566193 2666 ntBASIC1.3□□□□□ -2.2
SRP9P49458 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SRP9P49458 RNU6-884P-201ENST00000363889 107 ntBASIC1.3□□□□□ -2.2
SRP9P49458 RNU6-482P-201ENST00000391068 107 ntBASIC1.3□□□□□ -2.2
SRP9P49458 BTF3L4P2-201ENST00000392798 346 ntBASIC1.3□□□□□ -2.2
SRP9P49458 RNU2-63P-201ENST00000410792 194 ntBASIC1.3□□□□□ -2.2
SRP9P49458 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.3□□□□□ -2.2
SRP9P49458 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.3□□□□□ -2.2
SRP9P49458 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.3□□□□□ -2.2
SRP9P49458 AC007742.1-201ENST00000425789 329 ntBASIC1.3□□□□□ -2.2
SRP9P49458 AL445669.1-201ENST00000426743 755 ntBASIC1.3□□□□□ -2.2
SRP9P49458 VN1R108P-201ENST00000431580 830 ntBASIC1.3□□□□□ -2.2
SRP9P49458 AC005345.1-201ENST00000431868 217 ntBASIC1.3□□□□□ -2.2
SRP9P49458 MTCO1P57-201ENST00000432182 261 ntBASIC1.3□□□□□ -2.2
SRP9P49458 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.3□□□□□ -2.2
SRP9P49458 ELOCP26-201ENST00000436067 329 ntBASIC1.3□□□□□ -2.2
SRP9P49458 AL929288.2-201ENST00000446368 407 ntBASIC1.3□□□□□ -2.2
SRP9P49458 HSPE1P24-201ENST00000450782 238 ntBASIC1.3□□□□□ -2.2
SRP9P49458 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.3□□□□□ -2.2
SRP9P49458 AMD1P1-201ENST00000457220 922 ntBASIC1.3□□□□□ -2.2
SRP9P49458 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.3□□□□□ -2.2
SRP9P49458 RPS29P23-201ENST00000458635 123 ntBASIC1.3□□□□□ -2.2
SRP9P49458 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.3□□□□□ -2.2
SRP9P49458 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.3□□□□□ -2.2
SRP9P49458 AC084024.2-201ENST00000503480 791 ntBASIC1.3□□□□□ -2.2
SRP9P49458 MTCO3P42-201ENST00000509488 518 ntBASIC1.3□□□□□ -2.2
SRP9P49458 MTCO3P39-201ENST00000514812 518 ntBASIC1.3□□□□□ -2.2
SRP9P49458 SNORA31.24-201ENST00000517232 57 ntBASIC1.3□□□□□ -2.2
SRP9P49458 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SRP9P49458 EIF1AXP2-201ENST00000555940 413 ntBASIC1.3□□□□□ -2.2
SRP9P49458 AC012435.1-202ENST00000568772 240 ntBASIC1.3□□□□□ -2.2
SRP9P49458 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.3□□□□□ -2.2
SRP9P49458 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.3□□□□□ -2.2
SRP9P49458 AC091953.2-201ENST00000623979 160 ntBASIC1.3□□□□□ -2.2
SRP9P49458 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.3□□□□□ -2.2
SRP9P49458 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SRP9P49458 CDC27P3-201ENST00000635418 1910 ntBASIC1.3□□□□□ -2.2
SRP9P49458 AC005832.2-201ENST00000538921 1430 ntBASIC1.3□□□□□ -2.2
SRP9P49458 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.29□□□□□ -2.2
SRP9P49458 NDUFS5P1-201ENST00000405668 289 ntBASIC1.29□□□□□ -2.2
SRP9P49458 RNU6-516P-201ENST00000411381 104 ntBASIC1.29□□□□□ -2.2
SRP9P49458 USP9YP6-201ENST00000413550 854 ntBASIC1.29□□□□□ -2.2
SRP9P49458 RPS24P7-201ENST00000416921 246 ntBASIC1.29□□□□□ -2.2
SRP9P49458 AC244453.4-201ENST00000419150 388 ntBASIC1.29□□□□□ -2.2
SRP9P49458 AC246680.2-201ENST00000422106 389 ntBASIC1.29□□□□□ -2.2
SRP9P49458 AC007919.1-201ENST00000429380 217 ntBASIC1.29□□□□□ -2.2
SRP9P49458 AC244035.1-201ENST00000430042 390 ntBASIC1.29□□□□□ -2.2
SRP9P49458 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.29□□□□□ -2.2
SRP9P49458 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.29□□□□□ -2.2
SRP9P49458 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.29□□□□□ -2.2
SRP9P49458 COX7A2P2-201ENST00000505291 250 ntBASIC1.29□□□□□ -2.2
SRP9P49458 AC022483.1-201ENST00000514020 567 ntBASIC1.29□□□□□ -2.2
SRP9P49458 RNU6-760P-201ENST00000516078 97 ntBASIC1.29□□□□□ -2.2
SRP9P49458 ARL2BPP2-201ENST00000550907 489 ntBASIC1.29□□□□□ -2.2
SRP9P49458 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SRP9P49458 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.29□□□□□ -2.2
SRP9P49458 BX322635.1-201ENST00000605804 496 ntBASIC1.29□□□□□ -2.2
SRP9P49458 AL138478.1-201ENST00000612252 832 ntBASIC1.29□□□□□ -2.2
SRP9P49458 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.29□□□□□ -2.2
SRP9P49458 AL359757.2-201ENST00000624309 274 ntBASIC1.29□□□□□ -2.2
SRP9P49458 AC092192.1-201ENST00000633154 1018 ntBASIC1.29□□□□□ -2.2
SRP9P49458 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SRP9P49458 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
SRP9P49458 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
SRP9P49458 WWP1P1-201ENST00000466609 2769 ntBASIC1.28□□□□□ -2.2
SRP9P49458 RNU6-115P-201ENST00000364310 107 ntBASIC1.28□□□□□ -2.2
SRP9P49458 RNU6-60P-201ENST00000364792 103 ntBASIC1.28□□□□□ -2.2
SRP9P49458 MIR518A2-201ENST00000384966 87 ntBASIC1.28□□□□□ -2.2
SRP9P49458 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
SRP9P49458 RPL23AP29-201ENST00000397284 453 ntBASIC1.28□□□□□ -2.2
SRP9P49458 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SRP9P49458 LUZP4P1-201ENST00000415420 344 ntBASIC1.28□□□□□ -2.2
SRP9P49458 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.28□□□□□ -2.2
SRP9P49458 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.28□□□□□ -2.2
SRP9P49458 RN7SKP219-201ENST00000516825 296 ntBASIC1.28□□□□□ -2.2
SRP9P49458 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.28□□□□□ -2.2
SRP9P49458 AP004607.1-201ENST00000524456 203 ntBASIC1.28□□□□□ -2.2
SRP9P49458 AC233702.2-202ENST00000562547 291 ntBASIC1.28□□□□□ -2.2
SRP9P49458 AC007151.1-201ENST00000572774 483 ntBASIC1.28□□□□□ -2.2
SRP9P49458 BPTFP1-201ENST00000579209 492 ntBASIC1.28□□□□□ -2.2
SRP9P49458 AC103987.3-201ENST00000582071 292 ntBASIC1.28□□□□□ -2.2
SRP9P49458 MIR4765-201ENST00000585007 77 ntBASIC1.28□□□□□ -2.2
SRP9P49458 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.28□□□□□ -2.2
SRP9P49458 AL161729.4-201ENST00000604650 476 ntBASIC1.28□□□□□ -2.2
SRP9P49458 AC007349.4-201ENST00000608114 532 ntBASIC1.28□□□□□ -2.2
SRP9P49458 Z99571.1-201ENST00000636677 394 ntBASIC1.28□□□□□ -2.2
SRP9P49458 AC099063.3-201ENST00000642066 185 ntBASIC1.28□□□□□ -2.2
SRP9P49458 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SRP9P49458 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SRP9P49458 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.27□□□□□ -2.21
SRP9P49458 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SRP9P49458 RNU6-140P-201ENST00000384566 108 ntBASIC1.27□□□□□ -2.21
SRP9P49458 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.27□□□□□ -2.21
SRP9P49458 AL021407.1-201ENST00000404531 386 ntBASIC1.27□□□□□ -2.21
SRP9P49458 RPL30P13-201ENST00000418873 348 ntBASIC1.27□□□□□ -2.21
SRP9P49458 AC007098.1-201ENST00000420122 367 ntBASIC1.27□□□□□ -2.21
SRP9P49458 ZNF863P-201ENST00000426746 417 ntBASIC1.27□□□□□ -2.21
SRP9P49458 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 190.3 ms