Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.12□□□□□ -2.07
CX3CR1P49238 RPL21P132-201ENST00000331267 462 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 SNORA80A-201ENST00000363922 136 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 RNU6-512P-201ENST00000364438 103 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 SNORD114-30-201ENST00000364448 72 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 RNU6-1200P-201ENST00000384162 107 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 MIR483-201ENST00000385070 76 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CX3CR1P49238 AC119751.3-201ENST00000399720 670 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 AL359634.1-202ENST00000404721 284 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 U3.37-201ENST00000408528 213 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 RNU6-920P-201ENST00000410926 92 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 RPL22P18-201ENST00000417197 377 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 USP9YP27-201ENST00000418455 438 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.12□□□□□ -2.07
CX3CR1P49238 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.12□□□□□ -2.07
CX3CR1P49238 FCF1P1-201ENST00000432690 571 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.12□□□□□ -2.07
CX3CR1P49238 AL606662.1-201ENST00000445763 553 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 EEF1B2P7-201ENST00000451177 676 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.12□□□□□ -2.07
CX3CR1P49238 ANKRD26P4-201ENST00000455755 950 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 AC096576.1-201ENST00000489014 359 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.12□□□□□ -2.07
CX3CR1P49238 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.12□□□□□ -2.07
CX3CR1P49238 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.12□□□□□ -2.07
CX3CR1P49238 AC107222.1-201ENST00000510899 637 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 SCARNA3-201ENST00000517097 143 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.12□□□□□ -2.07
CX3CR1P49238 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.12□□□□□ -2.07
CX3CR1P49238 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.12□□□□□ -2.07
CX3CR1P49238 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.12□□□□□ -2.07
CX3CR1P49238 PRELID2P1-201ENST00000552837 301 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.12□□□□□ -2.07
CX3CR1P49238 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.12□□□□□ -2.07
CX3CR1P49238 MIR4760-201ENST00000585040 80 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 AL645944.1-201ENST00000603857 493 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 AP000240.1-201ENST00000609910 452 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 DUSP12P1-201ENST00000612874 516 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 CU459211.1-201ENST00000635667 749 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CX3CR1P49238 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.12□□□□□ -2.07
CX3CR1P49238 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CX3CR1P49238 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CX3CR1P49238 ADAM3A-203ENST00000461344 2157 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 UBE2L2-201ENST00000254302 429 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CX3CR1P49238 RNU4-28P-201ENST00000364739 141 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 RNU1-51P-201ENST00000365345 176 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 RNU6-769P-201ENST00000384407 104 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.11□□□□□ -2.07
CX3CR1P49238 RNA5SP184-201ENST00000411071 108 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 Z92545.1-201ENST00000411782 234 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.11□□□□□ -2.07
CX3CR1P49238 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.11□□□□□ -2.07
CX3CR1P49238 AL353729.1-201ENST00000425044 720 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CX3CR1P49238 MICF-203ENST00000432679 129 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 RPL36AP53-201ENST00000432891 316 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 AC005094.1-201ENST00000440420 368 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.11□□□□□ -2.07
CX3CR1P49238 IFNA11P-201ENST00000446352 526 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 HMGN2P10-201ENST00000448085 265 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 SNORD11.1-201ENST00000459482 85 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 RN7SL432P-201ENST00000484057 298 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.11□□□□□ -2.07
CX3CR1P49238 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.11□□□□□ -2.07
CX3CR1P49238 AC034244.1-201ENST00000507687 207 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.11□□□□□ -2.07
CX3CR1P49238 AC112673.1-201ENST00000513168 575 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.11□□□□□ -2.07
CX3CR1P49238 RN7SKP265-201ENST00000516448 223 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.11□□□□□ -2.07
CX3CR1P49238 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.11□□□□□ -2.07
CX3CR1P49238 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CX3CR1P49238 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.11□□□□□ -2.07
CX3CR1P49238 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.11□□□□□ -2.07
CX3CR1P49238 AC009097.3-201ENST00000563557 1018 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 MIR3167-201ENST00000579623 85 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CX3CR1P49238 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.11□□□□□ -2.07
CX3CR1P49238 MIR4999-201ENST00000585029 91 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 AL391001.1-201ENST00000602747 715 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 AL031281.1-201ENST00000604049 488 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 RNU6-88P-201ENST00000606801 100 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 AL449363.1-201ENST00000617815 186 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 AC007490.1-201ENST00000624321 703 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 AL136313.1-201ENST00000624804 202 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 AC103706.2-201ENST00000638080 240 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CX3CR1P49238 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.11□□□□□ -2.07
CX3CR1P49238 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.11□□□□□ -2.07
CX3CR1P49238 AC092125.1-201ENST00000562568 1995 ntBASIC2.1□□□□□ -2.07
CX3CR1P49238 AC007336.1-201ENST00000576365 3828 ntBASIC2.1□□□□□ -2.07
CX3CR1P49238 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CX3CR1P49238 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.1□□□□□ -2.07
CX3CR1P49238 RNU6-1214P-201ENST00000363650 109 ntBASIC2.1□□□□□ -2.07
CX3CR1P49238 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.1□□□□□ -2.07
CX3CR1P49238 RNU6-658P-201ENST00000384606 106 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms