Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC011471.1-201ENST00000585766 187 ntBASIC3.02□□□□□ -1.93
HNF4AP41235 AC007179.3-201ENST00000604976 235 ntBASIC3.02□□□□□ -1.93
HNF4AP41235 AC108747.1-201ENST00000609508 535 ntBASIC3.02□□□□□ -1.93
HNF4AP41235 AL355472.4-201ENST00000610233 626 ntBASIC3.02□□□□□ -1.93
HNF4AP41235 AC091304.9-201ENST00000612091 226 ntBASIC3.02□□□□□ -1.93
HNF4AP41235 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.02□□□□□ -1.93
HNF4AP41235 AC012150.2-201ENST00000621300 544 ntBASIC3.02□□□□□ -1.93
HNF4AP41235 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.02□□□□□ -1.93
HNF4AP41235 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HNF4AP41235 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.02□□□□□ -1.93
HNF4AP41235 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.02□□□□□ -1.93
HNF4AP41235 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HNF4AP41235 MIR208A-201ENST00000362287 71 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 SNORA38.1-201ENST00000364172 131 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 RNU6-1042P-201ENST00000384204 107 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 SNORA7.4-201ENST00000384249 137 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 RNU6-517P-201ENST00000384362 110 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 SNORA46-201ENST00000384762 135 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 Y_RNA.582-201ENST00000391023 95 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 SNORA26.7-201ENST00000391288 122 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HNF4AP41235 AL122016.1-201ENST00000403365 367 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.01□□□□□ -1.93
HNF4AP41235 RNU6-195P-201ENST00000411352 109 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 ELOCP17-201ENST00000414751 326 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 BX682237.1-201ENST00000415016 335 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 AL589872.1-201ENST00000426602 288 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 AC092427.1-202ENST00000430569 476 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 AC009961.2-201ENST00000435771 251 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.01□□□□□ -1.93
HNF4AP41235 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.01□□□□□ -1.93
HNF4AP41235 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.01□□□□□ -1.93
HNF4AP41235 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.01□□□□□ -1.93
HNF4AP41235 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.01□□□□□ -1.93
HNF4AP41235 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.01□□□□□ -1.93
HNF4AP41235 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.01□□□□□ -1.93
HNF4AP41235 SRRM1P2-201ENST00000464531 1192 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 AC126182.1-201ENST00000478134 357 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.01□□□□□ -1.93
HNF4AP41235 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.01□□□□□ -1.93
HNF4AP41235 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.01□□□□□ -1.93
HNF4AP41235 RNU6-201P-201ENST00000517100 61 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.01□□□□□ -1.93
HNF4AP41235 AC016957.1-201ENST00000534895 309 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.01□□□□□ -1.93
HNF4AP41235 GLYCAM1-201ENST00000546596 285 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 AC093012.1-202ENST00000549403 582 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.01□□□□□ -1.93
HNF4AP41235 UBL5P2-201ENST00000583788 219 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.01□□□□□ -1.93
HNF4AP41235 AC107304.1-201ENST00000604229 296 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 AC007038.2-201ENST00000608095 740 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 OR10AB1P-201ENST00000609613 938 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 AC009159.1-201ENST00000618386 642 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 MIR622-201ENST00000638396 96 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HNF4AP41235 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
HNF4AP41235 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
HNF4AP41235 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.01□□□□□ -1.93
HNF4AP41235 AC027514.1-201ENST00000588561 1603 ntBASIC3.01□□□□□ -1.93
HNF4AP41235 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HNF4AP41235 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3□□□□□ -1.93
HNF4AP41235 MTND5P26-201ENST00000426018 1752 ntBASIC3□□□□□ -1.93
HNF4AP41235 RNU6-884P-201ENST00000363889 107 ntBASIC3□□□□□ -1.93
HNF4AP41235 RNY4P34-201ENST00000364779 95 ntBASIC3□□□□□ -1.93
HNF4AP41235 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
HNF4AP41235 SNORD15B-201ENST00000384714 146 ntBASIC3□□□□□ -1.93
HNF4AP41235 MIR19A-201ENST00000384878 82 ntBASIC3□□□□□ -1.93
HNF4AP41235 RPS3AP36-201ENST00000398190 775 ntBASIC3□□□□□ -1.93
HNF4AP41235 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3□□□□□ -1.93
HNF4AP41235 OFD1P1Y-201ENST00000411756 1225 ntBASIC3□□□□□ -1.93
HNF4AP41235 UBE2V1P10-201ENST00000414685 269 ntBASIC3□□□□□ -1.93
HNF4AP41235 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3□□□□□ -1.93
HNF4AP41235 AC245054.2-201ENST00000415639 319 ntBASIC3□□□□□ -1.93
HNF4AP41235 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3□□□□□ -1.93
HNF4AP41235 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3□□□□□ -1.93
HNF4AP41235 BX295541.1-201ENST00000417774 250 ntBASIC3□□□□□ -1.93
HNF4AP41235 AC093151.1-201ENST00000427711 313 ntBASIC3□□□□□ -1.93
HNF4AP41235 MTND1P4-201ENST00000435196 415 ntBASIC3□□□□□ -1.93
HNF4AP41235 RPS15AP5-201ENST00000436276 388 ntBASIC3□□□□□ -1.93
HNF4AP41235 DNAJC19P4-201ENST00000440115 345 ntBASIC3□□□□□ -1.93
HNF4AP41235 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3□□□□□ -1.93
HNF4AP41235 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3□□□□□ -1.93
HNF4AP41235 RPL23AP70-201ENST00000483361 460 ntBASIC3□□□□□ -1.93
HNF4AP41235 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3□□□□□ -1.93
HNF4AP41235 AL117351.2-201ENST00000513571 157 ntBASIC3□□□□□ -1.93
HNF4AP41235 AC022616.6-201ENST00000520479 119 ntBASIC3□□□□□ -1.93
HNF4AP41235 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3□□□□□ -1.93
HNF4AP41235 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3□□□□□ -1.93
HNF4AP41235 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3□□□□□ -1.93
HNF4AP41235 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3□□□□□ -1.93
HNF4AP41235 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3□□□□□ -1.93
HNF4AP41235 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3□□□□□ -1.93
HNF4AP41235 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3□□□□□ -1.93
HNF4AP41235 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3□□□□□ -1.93
HNF4AP41235 MTND4LP5-201ENST00000605152 292 ntBASIC3□□□□□ -1.93
HNF4AP41235 AL161734.1-201ENST00000609720 557 ntBASIC3□□□□□ -1.93
HNF4AP41235 AC103710.1-201ENST00000610003 901 ntBASIC3□□□□□ -1.93
HNF4AP41235 AC096577.2-201ENST00000611455 153 ntBASIC3□□□□□ -1.93
HNF4AP41235 UBE2Q2P2-203ENST00000613592 761 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms