Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RPS29P6-201ENST00000438196 145 ntBASIC2.96□□□□□ -1.94
VTNP04004 RPS24P1-201ENST00000438550 371 ntBASIC2.96□□□□□ -1.94
VTNP04004 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.96□□□□□ -1.94
VTNP04004 AC008481.1-201ENST00000463278 396 ntBASIC2.96□□□□□ -1.94
VTNP04004 RPS3AP17-201ENST00000472594 777 ntBASIC2.96□□□□□ -1.94
VTNP04004 RN7SL283P-201ENST00000489055 303 ntBASIC2.96□□□□□ -1.94
VTNP04004 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.96□□□□□ -1.94
VTNP04004 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.96□□□□□ -1.94
VTNP04004 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VTNP04004 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.96□□□□□ -1.94
VTNP04004 AL359273.1-201ENST00000510918 627 ntBASIC2.96□□□□□ -1.94
VTNP04004 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.96□□□□□ -1.94
VTNP04004 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.96□□□□□ -1.94
VTNP04004 Vault.3-201ENST00000516676 95 ntBASIC2.96□□□□□ -1.94
VTNP04004 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.96□□□□□ -1.94
VTNP04004 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.96□□□□□ -1.94
VTNP04004 OR4H12P-201ENST00000556269 907 ntBASIC2.96□□□□□ -1.94
VTNP04004 AC234778.2-201ENST00000566241 354 ntBASIC2.96□□□□□ -1.94
VTNP04004 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.96□□□□□ -1.94
VTNP04004 AC146944.4-201ENST00000602697 718 ntBASIC2.96□□□□□ -1.94
VTNP04004 AL136363.2-201ENST00000604173 851 ntBASIC2.96□□□□□ -1.94
VTNP04004 AC107294.3-201ENST00000609211 526 ntBASIC2.96□□□□□ -1.94
VTNP04004 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.96□□□□□ -1.94
VTNP04004 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.96□□□□□ -1.94
VTNP04004 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.96□□□□□ -1.94
VTNP04004 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
VTNP04004 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VTNP04004 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.96□□□□□ -1.94
VTNP04004 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
VTNP04004 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.95□□□□□ -1.94
VTNP04004 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VTNP04004 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VTNP04004 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VTNP04004 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.95□□□□□ -1.94
VTNP04004 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VTNP04004 RNU5A-6P-201ENST00000384136 116 ntBASIC2.95□□□□□ -1.94
VTNP04004 RNU2-66P-201ENST00000410650 161 ntBASIC2.95□□□□□ -1.94
VTNP04004 HIGD1AP11-201ENST00000438361 280 ntBASIC2.95□□□□□ -1.94
VTNP04004 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.95□□□□□ -1.94
VTNP04004 AC010631.1-201ENST00000474150 156 ntBASIC2.95□□□□□ -1.94
VTNP04004 HMGN2P13-201ENST00000476476 274 ntBASIC2.95□□□□□ -1.94
VTNP04004 RNU6-430P-201ENST00000517078 107 ntBASIC2.95□□□□□ -1.94
VTNP04004 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.95□□□□□ -1.94
VTNP04004 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.95□□□□□ -1.94
VTNP04004 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.95□□□□□ -1.94
VTNP04004 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.95□□□□□ -1.94
VTNP04004 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.95□□□□□ -1.94
VTNP04004 AL161729.4-201ENST00000604650 476 ntBASIC2.95□□□□□ -1.94
VTNP04004 AL451064.1-201ENST00000607718 471 ntBASIC2.95□□□□□ -1.94
VTNP04004 AC005332.10-201ENST00000612725 619 ntBASIC2.95□□□□□ -1.94
VTNP04004 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
VTNP04004 uc_338.12-201ENST00000616344 181 ntBASIC2.95□□□□□ -1.94
VTNP04004 MIR6076-201ENST00000617521 113 ntBASIC2.95□□□□□ -1.94
VTNP04004 AC092608.2-201ENST00000624427 218 ntBASIC2.95□□□□□ -1.94
VTNP04004 AC243829.7-201ENST00000633081 225 ntBASIC2.95□□□□□ -1.94
VTNP04004 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VTNP04004 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.94□□□□□ -1.94
VTNP04004 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VTNP04004 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
VTNP04004 MIR1290-201ENST00000408735 78 ntBASIC2.94□□□□□ -1.94
VTNP04004 RNU6-1077P-201ENST00000410506 102 ntBASIC2.94□□□□□ -1.94
VTNP04004 NDUFB4P5-201ENST00000415445 361 ntBASIC2.94□□□□□ -1.94
VTNP04004 MTCO1P21-201ENST00000416634 589 ntBASIC2.94□□□□□ -1.94
VTNP04004 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.94□□□□□ -1.94
VTNP04004 TMEM167AP1-201ENST00000423409 219 ntBASIC2.94□□□□□ -1.94
VTNP04004 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.94□□□□□ -1.94
VTNP04004 FCF1P1-201ENST00000432690 571 ntBASIC2.94□□□□□ -1.94
VTNP04004 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.94□□□□□ -1.94
VTNP04004 MTCO3P45-201ENST00000443036 613 ntBASIC2.94□□□□□ -1.94
VTNP04004 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.94□□□□□ -1.94
VTNP04004 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VTNP04004 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.94□□□□□ -1.94
VTNP04004 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.94□□□□□ -1.94
VTNP04004 RBM43P1-201ENST00000476891 1081 ntBASIC2.94□□□□□ -1.94
VTNP04004 CDC42P4-201ENST00000510507 563 ntBASIC2.94□□□□□ -1.94
VTNP04004 AC096725.1-201ENST00000514266 313 ntBASIC2.94□□□□□ -1.94
VTNP04004 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
VTNP04004 AC009063.1-201ENST00000563342 702 ntBASIC2.94□□□□□ -1.94
VTNP04004 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.94□□□□□ -1.94
VTNP04004 AC010653.1-201ENST00000571108 881 ntBASIC2.94□□□□□ -1.94
VTNP04004 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.94□□□□□ -1.94
VTNP04004 NRBF2P1-201ENST00000587407 859 ntBASIC2.94□□□□□ -1.94
VTNP04004 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.94□□□□□ -1.94
VTNP04004 NDUFA8P1-201ENST00000605525 367 ntBASIC2.94□□□□□ -1.94
VTNP04004 AC012557.2-201ENST00000605919 418 ntBASIC2.94□□□□□ -1.94
VTNP04004 AC109347.2-201ENST00000610220 349 ntBASIC2.94□□□□□ -1.94
VTNP04004 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.94□□□□□ -1.94
VTNP04004 AC004696.1-201ENST00000614345 607 ntBASIC2.94□□□□□ -1.94
VTNP04004 MIR6817-201ENST00000615588 66 ntBASIC2.94□□□□□ -1.94
VTNP04004 AC015540.1-201ENST00000615828 501 ntBASIC2.94□□□□□ -1.94
VTNP04004 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.94□□□□□ -1.94
VTNP04004 AC008568.2-201ENST00000623862 2313 ntBASIC2.94□□□□□ -1.94
VTNP04004 AL359693.1-201ENST00000614959 2407 ntBASIC2.94□□□□□ -1.94
VTNP04004 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
VTNP04004 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VTNP04004 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VTNP04004 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VTNP04004 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VTNP04004 ASNSP3-201ENST00000451989 1306 ntBASIC2.93□□□□□ -1.94
VTNP04004 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms