Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 OR6K5P-201ENST00000447050 945 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.66□□□□□ -2.3
COL6A5A8TX70 AC023141.11-201ENST00000508864 202 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 AC096745.1-201ENST00000509945 370 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.66□□□□□ -2.3
COL6A5A8TX70 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.66□□□□□ -2.3
COL6A5A8TX70 AC008269.2-201ENST00000561915 1105 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 AC133485.1-201ENST00000567176 124 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 AC138907.6-201ENST00000568401 126 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 LLPHP1-201ENST00000603571 367 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 AC106052.1-201ENST00000608029 497 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 OR4G2P-201ENST00000328113 903 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 Y_RNA.185-201ENST00000363894 100 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 RNU6-923P-201ENST00000364753 107 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 MIR150-201ENST00000385048 84 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 MIR601-201ENST00000385256 79 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 AL139397.2-201ENST00000404529 772 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.66□□□□□ -2.3
COL6A5A8TX70 AC097493.1-201ENST00000463958 372 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 AC010285.1-201ENST00000470580 392 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 AL135752.1-201ENST00000479477 471 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 RNU1-61P-201ENST00000516107 151 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 RN7SKP34-201ENST00000516142 244 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 AC068714.1-201ENST00000559623 800 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 AL355297.2-201ENST00000604792 129 ntBASIC0.66□□□□□ -2.3
COL6A5A8TX70 Y_RNA.228-201ENST00000364346 98 ntBASIC0.65□□□□□ -2.31
COL6A5A8TX70 Y_RNA.468-201ENST00000384298 102 ntBASIC0.65□□□□□ -2.31
COL6A5A8TX70 SNORA8.3-201ENST00000384679 139 ntBASIC0.65□□□□□ -2.31
COL6A5A8TX70 RNU6-733P-201ENST00000410759 104 ntBASIC0.65□□□□□ -2.31
COL6A5A8TX70 AL133384.1-201ENST00000412744 351 ntBASIC0.65□□□□□ -2.31
COL6A5A8TX70 OSTCP8-201ENST00000445117 448 ntBASIC0.65□□□□□ -2.31
COL6A5A8TX70 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
COL6A5A8TX70 RNY1P9-201ENST00000532431 109 ntBASIC0.65□□□□□ -2.31
COL6A5A8TX70 AL096840.1-201ENST00000603287 93 ntBASIC0.65□□□□□ -2.31
COL6A5A8TX70 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.65□□□□□ -2.31
COL6A5A8TX70 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
COL6A5A8TX70 Y_RNA.204-201ENST00000364112 102 ntBASIC0.65□□□□□ -2.31
COL6A5A8TX70 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.65□□□□□ -2.31
COL6A5A8TX70 Y_RNA.447-201ENST00000384184 113 ntBASIC0.65□□□□□ -2.31
COL6A5A8TX70 MIR607-201ENST00000385241 96 ntBASIC0.65□□□□□ -2.31
COL6A5A8TX70 RNA5SP63-201ENST00000391225 112 ntBASIC0.65□□□□□ -2.31
COL6A5A8TX70 AL357134.1-201ENST00000445848 426 ntBASIC0.65□□□□□ -2.31
COL6A5A8TX70 SNORD97-201ENST00000459187 142 ntBASIC0.65□□□□□ -2.31
COL6A5A8TX70 AC005410.1-202ENST00000460347 485 ntBASIC0.65□□□□□ -2.31
COL6A5A8TX70 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
COL6A5A8TX70 RNU6-351P-201ENST00000516097 100 ntBASIC0.65□□□□□ -2.31
COL6A5A8TX70 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.65□□□□□ -2.31
COL6A5A8TX70 ZNF702P-202ENST00000434269 1966 ntBASIC0.65□□□□□ -2.31
COL6A5A8TX70 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
COL6A5A8TX70 AC096649.2-201ENST00000416186 393 ntBASIC0.64□□□□□ -2.31
COL6A5A8TX70 AC241520.1-201ENST00000422654 1099 ntBASIC0.64□□□□□ -2.31
COL6A5A8TX70 AC022022.1-201ENST00000430304 178 ntBASIC0.64□□□□□ -2.31
COL6A5A8TX70 HMGN2P10-201ENST00000448085 265 ntBASIC0.64□□□□□ -2.31
COL6A5A8TX70 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.64□□□□□ -2.31
COL6A5A8TX70 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.64□□□□□ -2.31
COL6A5A8TX70 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.64□□□□□ -2.31
COL6A5A8TX70 AC008739.2-201ENST00000597006 317 ntBASIC0.64□□□□□ -2.31
COL6A5A8TX70 AC109809.1-201ENST00000619665 545 ntBASIC0.64□□□□□ -2.31
COL6A5A8TX70 AC091932.3-201ENST00000624223 323 ntBASIC0.64□□□□□ -2.31
COL6A5A8TX70 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.64□□□□□ -2.31
COL6A5A8TX70 SNORA51.2-201ENST00000364595 132 ntBASIC0.64□□□□□ -2.31
COL6A5A8TX70 MIR604-201ENST00000384880 94 ntBASIC0.64□□□□□ -2.31
COL6A5A8TX70 CIR1P3-201ENST00000405137 479 ntBASIC0.64□□□□□ -2.31
COL6A5A8TX70 RNA5SP511-201ENST00000410487 115 ntBASIC0.64□□□□□ -2.31
COL6A5A8TX70 SDAD1P3-201ENST00000427380 333 ntBASIC0.64□□□□□ -2.31
COL6A5A8TX70 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.64□□□□□ -2.31
COL6A5A8TX70 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.64□□□□□ -2.31
COL6A5A8TX70 SNRPGP15-201ENST00000600149 222 ntBASIC0.64□□□□□ -2.31
COL6A5A8TX70 AP000811.1-201ENST00000603803 651 ntBASIC0.64□□□□□ -2.31
COL6A5A8TX70 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
COL6A5A8TX70 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.63□□□□□ -2.31
COL6A5A8TX70 RNA5SP499-201ENST00000363982 119 ntBASIC0.63□□□□□ -2.31
COL6A5A8TX70 RNA5SP498-201ENST00000411342 120 ntBASIC0.63□□□□□ -2.31
COL6A5A8TX70 AC015922.2-201ENST00000435593 184 ntBASIC0.63□□□□□ -2.31
COL6A5A8TX70 AL500527.1-201ENST00000448532 255 ntBASIC0.63□□□□□ -2.31
COL6A5A8TX70 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.63□□□□□ -2.31
COL6A5A8TX70 AC091965.2-201ENST00000512324 613 ntBASIC0.63□□□□□ -2.31
COL6A5A8TX70 RNU6-567P-201ENST00000516746 107 ntBASIC0.63□□□□□ -2.31
COL6A5A8TX70 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.63□□□□□ -2.31
COL6A5A8TX70 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.63□□□□□ -2.31
COL6A5A8TX70 ELOCP5-201ENST00000604924 333 ntBASIC0.63□□□□□ -2.31
COL6A5A8TX70 AC107214.2-201ENST00000608204 634 ntBASIC0.63□□□□□ -2.31
COL6A5A8TX70 AC110079.1-202ENST00000635213 138 ntBASIC0.63□□□□□ -2.31
COL6A5A8TX70 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.63□□□□□ -2.31
COL6A5A8TX70 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.63□□□□□ -2.31
COL6A5A8TX70 AC020699.1-201ENST00000505161 445 ntBASIC0.63□□□□□ -2.31
COL6A5A8TX70 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.63□□□□□ -2.31
COL6A5A8TX70 RNA5SP471-201ENST00000516971 106 ntBASIC0.63□□□□□ -2.31
COL6A5A8TX70 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.63□□□□□ -2.31
COL6A5A8TX70 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.63□□□□□ -2.31
COL6A5A8TX70 AC010620.1-201ENST00000601088 1102 ntBASIC0.63□□□□□ -2.31
COL6A5A8TX70 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.63□□□□□ -2.31
COL6A5A8TX70 AC073592.7-201ENST00000623659 507 ntBASIC0.63□□□□□ -2.31
COL6A5A8TX70 SNORA62.1-201ENST00000364287 154 ntBASIC0.62□□□□□ -2.31
COL6A5A8TX70 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.62□□□□□ -2.31
COL6A5A8TX70 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.62□□□□□ -2.31
COL6A5A8TX70 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.62□□□□□ -2.31
COL6A5A8TX70 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.62□□□□□ -2.31
COL6A5A8TX70 MTCO2P32-201ENST00000514865 403 ntBASIC0.62□□□□□ -2.31
COL6A5A8TX70 AP004247.1-201ENST00000531556 1289 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms