Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 RNU1-40P-201ENST00000516816 164 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 RNU1-97P-201ENST00000516872 164 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC021451.1-201ENST00000523498 1129 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 OR5AQ1P-201ENST00000527596 927 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 ANP32BP3-201ENST00000559213 706 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC105137.2-201ENST00000569073 466 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 MIR4319-201ENST00000577285 85 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 MIR3935-201ENST00000583472 104 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 SDR42E1P2-201ENST00000614861 481 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 SDR42E1P4-201ENST00000620894 481 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC004808.1-201ENST00000627671 721 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 CENPCP1-201ENST00000533085 2578 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 RNA5SP68-201ENST00000363885 119 ntBASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 RNU1-91P-201ENST00000364746 163 ntBASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 RNU1-73P-201ENST00000383971 164 ntBASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 RNU6-432P-201ENST00000384196 109 ntBASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 ERHP2-201ENST00000402323 299 ntBASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 AL359511.1-201ENST00000402970 211 ntBASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 FABP5P14-201ENST00000437273 393 ntBASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 MTND1P31-201ENST00000449206 961 ntBASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 RNA5SP233-201ENST00000459153 113 ntBASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC025033.1-201ENST00000463883 194 ntBASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC112206.4-201ENST00000515142 405 ntBASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 SNORA31.25-201ENST00000517242 134 ntBASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 OR11H5P-201ENST00000554039 926 ntBASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC004805.2-201ENST00000605382 482 ntBASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC068276.1-201ENST00000605793 379 ntBASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 AF129408.1-201ENST00000608767 431 ntBASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 uc_338.14-201ENST00000613162 166 ntBASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 AL160394.1-201ENST00000624765 724 ntBASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COMMD3-BMI1R4GMX3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 RNU6-486P-201ENST00000363116 107 ntBASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 RPL17P12-201ENST00000413391 526 ntBASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AL449283.1-202ENST00000418249 604 ntBASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 NUP35P1-201ENST00000422734 947 ntBASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 RPL23AP7-203ENST00000449021 469 ntBASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 PAXBP1P1-201ENST00000449315 447 ntBASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 ZNF886P-201ENST00000450781 723 ntBASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC004924.1-201ENST00000480160 781 ntBASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AF213884.2-201ENST00000510417 903 ntBASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC110760.3-202ENST00000515177 371 ntBASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 RNA5SP356-201ENST00000515972 94 ntBASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 RNU2-19P-201ENST00000517288 84 ntBASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AF038458.1-201ENST00000588406 262 ntBASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC090186.1-201ENST00000605991 572 ntBASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC245297.2-201ENST00000610119 565 ntBASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 TUG1_2.1-201ENST00000614234 87 ntBASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 MIR6852-201ENST00000621699 66 ntBASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
COMMD3-BMI1R4GMX3 AL359854.1-201ENST00000614203 1594 ntBASIC2.11□□□□□ -2.07
COMMD3-BMI1R4GMX3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
COMMD3-BMI1R4GMX3 Y_RNA.245-201ENST00000364493 95 ntBASIC2.11□□□□□ -2.07
COMMD3-BMI1R4GMX3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.11□□□□□ -2.07
COMMD3-BMI1R4GMX3 OR5H15-201ENST00000383696 930 ntBASIC2.11□□□□□ -2.07
COMMD3-BMI1R4GMX3 Y_RNA.472-201ENST00000384322 102 ntBASIC2.11□□□□□ -2.07
COMMD3-BMI1R4GMX3 MIR196B-201ENST00000384852 84 ntBASIC2.11□□□□□ -2.07
COMMD3-BMI1R4GMX3 RNA5SP184-201ENST00000411071 108 ntBASIC2.11□□□□□ -2.07
COMMD3-BMI1R4GMX3 AL030996.1-201ENST00000411430 235 ntBASIC2.11□□□□□ -2.07
COMMD3-BMI1R4GMX3 RPL26P27-201ENST00000414397 437 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms