Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
KLHL28Q9NXS3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 U8.8-201ENST00000365399 135 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 MIR27B-201ENST00000385129 97 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 AL139397.2-201ENST00000404529 772 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 RN7SKP284-201ENST00000411002 343 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 MICF-203ENST00000432679 129 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 RPL7P18-201ENST00000478965 734 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 RPS27P27-201ENST00000498779 255 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 AC093281.2-201ENST00000510153 597 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 UBTFL10-201ENST00000528532 562 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 AC091544.4-201ENST00000555268 342 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 AC007151.1-201ENST00000572774 483 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 MIR5571-201ENST00000577998 113 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 MIR3199-1-201ENST00000582434 88 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 AC091057.3-201ENST00000602684 733 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 AL391813.1-201ENST00000603098 260 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 RNU6-88P-201ENST00000606801 100 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 AC007038.2-201ENST00000608095 740 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 AL391834.2-201ENST00000609982 546 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 AC022306.3-201ENST00000619930 550 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 AC012640.5-201ENST00000623897 319 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 AC079416.3-201ENST00000624479 549 ntBASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.29□□□□□ -2.04
KLHL28Q9NXS3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 SNORA3A-201ENST00000364113 130 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 XGY1-201ENST00000381172 446 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 RSL24D1P4-201ENST00000400938 484 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 AL359634.1-202ENST00000404721 284 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 AL117351.1-201ENST00000438864 766 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 FAM103A2P-201ENST00000444122 354 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 RPL7P36-201ENST00000444633 681 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 MTATP6P7-201ENST00000453315 681 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 AL121769.1-201ENST00000469473 401 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 TRBV1-201ENST00000476502 284 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 LTV1P1-201ENST00000510683 1237 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 SNORA31.6-201ENST00000516241 130 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 RNA5SP165-201ENST00000517142 115 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 RPL7P20-201ENST00000520308 745 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 AP005902.1-201ENST00000521358 186 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 AC027176.1-201ENST00000560204 514 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 MIR3945-201ENST00000581853 98 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 AC098826.3-201ENST00000603823 466 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 DPPA3P3-201ENST00000603842 430 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 AL161798.1-201ENST00000604630 131 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 AL592221.1-201ENST00000605266 382 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 AC080013.3-201ENST00000606839 578 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 AL139022.2-201ENST00000606934 443 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 AC012150.2-201ENST00000621300 544 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 MIR3199-2-201ENST00000636243 86 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 AL445984.1-201ENST00000637834 659 ntBASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.28□□□□□ -2.04
KLHL28Q9NXS3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 MIR218-1-201ENST00000384999 110 ntBASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 RNU2-68P-201ENST00000410878 191 ntBASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 AF274854.1-201ENST00000413236 615 ntBASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 EIF4EP4-201ENST00000424916 578 ntBASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 HSFY7P-201ENST00000432672 318 ntBASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 HSFY8P-201ENST00000437934 318 ntBASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 AC005094.1-201ENST00000440420 368 ntBASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 HSFY5P-201ENST00000453726 309 ntBASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms