Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
NPAS2Q99743 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.43□□□□□ -2.02
NPAS2Q99743 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
NPAS2Q99743 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NPAS2Q99743 RNU6-1167P-201ENST00000363227 94 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 RNU1-73P-201ENST00000383971 164 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 RNU6-1083P-201ENST00000384022 107 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 ANAPC10P1-201ENST00000395991 556 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 AL359634.1-202ENST00000404721 284 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 RNU6-757P-201ENST00000410334 100 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 AL008987.1-201ENST00000415528 237 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.42□□□□□ -2.02
NPAS2Q99743 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.42□□□□□ -2.02
NPAS2Q99743 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.42□□□□□ -2.02
NPAS2Q99743 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.42□□□□□ -2.02
NPAS2Q99743 AC010153.1-201ENST00000432862 727 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 AC005094.1-201ENST00000440420 368 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NPAS2Q99743 FAM103A2P-201ENST00000444122 354 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 COX6CP12-201ENST00000446748 202 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.42□□□□□ -2.02
NPAS2Q99743 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.42□□□□□ -2.02
NPAS2Q99743 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.42□□□□□ -2.02
NPAS2Q99743 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
NPAS2Q99743 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.42□□□□□ -2.02
NPAS2Q99743 RNA5SP471-201ENST00000516971 106 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 UBTFL10-201ENST00000528532 562 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 AC068587.4-201ENST00000533893 186 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.42□□□□□ -2.02
NPAS2Q99743 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.42□□□□□ -2.02
NPAS2Q99743 MRPS36P5-201ENST00000551909 298 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 AC136618.2-201ENST00000575091 400 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.42□□□□□ -2.02
NPAS2Q99743 AC061975.8-201ENST00000587058 721 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 AL645944.1-201ENST00000603857 493 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 AC007038.2-201ENST00000608095 740 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 AC072039.2-201ENST00000608883 439 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 AL589743.7-201ENST00000612637 233 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 AL449363.1-201ENST00000617815 186 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 AC112204.3-201ENST00000623822 332 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 AC092608.2-201ENST00000624427 218 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NPAS2Q99743 AC010889.1-201ENST00000566193 2666 ntBASIC2.42□□□□□ -2.02
NPAS2Q99743 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.41□□□□□ -2.02
NPAS2Q99743 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
NPAS2Q99743 RNU1-51P-201ENST00000365345 176 ntBASIC2.41□□□□□ -2.02
NPAS2Q99743 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
NPAS2Q99743 SNORA67.4-201ENST00000384688 142 ntBASIC2.41□□□□□ -2.02
NPAS2Q99743 RNU6-1072P-201ENST00000384703 107 ntBASIC2.41□□□□□ -2.02
NPAS2Q99743 RNU6-443P-201ENST00000384780 107 ntBASIC2.41□□□□□ -2.02
NPAS2Q99743 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.41□□□□□ -2.02
NPAS2Q99743 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.41□□□□□ -2.02
NPAS2Q99743 SKA2P1-201ENST00000425592 390 ntBASIC2.41□□□□□ -2.02
NPAS2Q99743 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.41□□□□□ -2.02
NPAS2Q99743 AC009961.3-201ENST00000449832 765 ntBASIC2.41□□□□□ -2.02
NPAS2Q99743 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.41□□□□□ -2.02
NPAS2Q99743 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.41□□□□□ -2.02
NPAS2Q99743 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.41□□□□□ -2.02
NPAS2Q99743 MTCYBP43-201ENST00000513621 740 ntBASIC2.41□□□□□ -2.02
NPAS2Q99743 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.41□□□□□ -2.02
NPAS2Q99743 RN7SKP265-201ENST00000516448 223 ntBASIC2.41□□□□□ -2.02
NPAS2Q99743 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.41□□□□□ -2.02
NPAS2Q99743 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.41□□□□□ -2.02
NPAS2Q99743 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.41□□□□□ -2.02
NPAS2Q99743 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.41□□□□□ -2.02
NPAS2Q99743 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.41□□□□□ -2.02
NPAS2Q99743 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.41□□□□□ -2.02
NPAS2Q99743 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.41□□□□□ -2.02
NPAS2Q99743 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.41□□□□□ -2.02
NPAS2Q99743 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.41□□□□□ -2.02
NPAS2Q99743 AP000403.1-201ENST00000603349 851 ntBASIC2.41□□□□□ -2.02
NPAS2Q99743 AC103710.1-201ENST00000610003 901 ntBASIC2.41□□□□□ -2.02
NPAS2Q99743 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.41□□□□□ -2.02
NPAS2Q99743 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
NPAS2Q99743 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
NPAS2Q99743 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
NPAS2Q99743 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NPAS2Q99743 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NPAS2Q99743 RNU6-723P-201ENST00000383973 107 ntBASIC2.4□□□□□ -2.03
NPAS2Q99743 BTF3L4P3-201ENST00000418879 476 ntBASIC2.4□□□□□ -2.03
NPAS2Q99743 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.4□□□□□ -2.03
NPAS2Q99743 MICF-203ENST00000432679 129 ntBASIC2.4□□□□□ -2.03
NPAS2Q99743 AC098826.1-201ENST00000433943 471 ntBASIC2.4□□□□□ -2.03
NPAS2Q99743 CR769767.1-201ENST00000436337 346 ntBASIC2.4□□□□□ -2.03
NPAS2Q99743 AL117351.1-201ENST00000438864 766 ntBASIC2.4□□□□□ -2.03
NPAS2Q99743 MTATP6P30-201ENST00000443540 664 ntBASIC2.4□□□□□ -2.03
NPAS2Q99743 RPL32P28-201ENST00000443577 397 ntBASIC2.4□□□□□ -2.03
NPAS2Q99743 CECR9-201ENST00000453421 199 ntBASIC2.4□□□□□ -2.03
NPAS2Q99743 SNORD11.1-201ENST00000459482 85 ntBASIC2.4□□□□□ -2.03
NPAS2Q99743 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.4□□□□□ -2.03
NPAS2Q99743 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.4□□□□□ -2.03
NPAS2Q99743 OR5BN1P-201ENST00000532955 829 ntBASIC2.4□□□□□ -2.03
NPAS2Q99743 AC243972.3-201ENST00000539655 198 ntBASIC2.4□□□□□ -2.03
NPAS2Q99743 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.4□□□□□ -2.03
NPAS2Q99743 AC009097.3-201ENST00000563557 1018 ntBASIC2.4□□□□□ -2.03
NPAS2Q99743 AC023824.2-201ENST00000566185 400 ntBASIC2.4□□□□□ -2.03
NPAS2Q99743 AC007151.1-201ENST00000572774 483 ntBASIC2.4□□□□□ -2.03
NPAS2Q99743 AL391813.1-201ENST00000603098 260 ntBASIC2.4□□□□□ -2.03
NPAS2Q99743 AC098826.3-201ENST00000603823 466 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms