Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SCG3Q8WXD2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SCG3Q8WXD2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SCG3Q8WXD2 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 A2MP1-204ENST00000566278 4130 ntBASIC5.08□□□□□ -1.6
SCG3Q8WXD2 AL391987.6-201ENST00000305671 199 ntBASIC5.08□□□□□ -1.6
SCG3Q8WXD2 RNA5SP443-201ENST00000363083 132 ntBASIC5.08□□□□□ -1.6
SCG3Q8WXD2 U3.6-201ENST00000363622 211 ntBASIC5.08□□□□□ -1.6
SCG3Q8WXD2 Y_RNA.539-201ENST00000384635 107 ntBASIC5.08□□□□□ -1.6
SCG3Q8WXD2 MIR10A-201ENST00000385043 110 ntBASIC5.08□□□□□ -1.6
SCG3Q8WXD2 MIR190B-201ENST00000401119 79 ntBASIC5.08□□□□□ -1.6
SCG3Q8WXD2 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 NDUFB4P7-201ENST00000423198 363 ntBASIC5.08□□□□□ -1.6
SCG3Q8WXD2 RPL23AP25-201ENST00000430973 463 ntBASIC5.08□□□□□ -1.6
SCG3Q8WXD2 AL358472.1-201ENST00000431295 329 ntBASIC5.08□□□□□ -1.6
SCG3Q8WXD2 RPS29P9-201ENST00000440360 171 ntBASIC5.08□□□□□ -1.6
SCG3Q8WXD2 AL354714.3-201ENST00000447284 493 ntBASIC5.08□□□□□ -1.6
SCG3Q8WXD2 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 AL356981.1-201ENST00000454879 684 ntBASIC5.08□□□□□ -1.6
SCG3Q8WXD2 SNORA81.3-201ENST00000517283 198 ntBASIC5.08□□□□□ -1.6
SCG3Q8WXD2 AC025755.1-201ENST00000521306 278 ntBASIC5.08□□□□□ -1.6
SCG3Q8WXD2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 INTS6P1-201ENST00000504674 2530 ntBASIC5.08□□□□□ -1.6
SCG3Q8WXD2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCG3Q8WXD2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 RNA5SP123-201ENST00000363244 119 ntBASIC5.07□□□□□ -1.6
SCG3Q8WXD2 Y_RNA.237-201ENST00000364439 102 ntBASIC5.07□□□□□ -1.6
SCG3Q8WXD2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 SNORD115-46-201ENST00000390982 71 ntBASIC5.07□□□□□ -1.6
SCG3Q8WXD2 RNU2-33P-201ENST00000410344 192 ntBASIC5.07□□□□□ -1.6
SCG3Q8WXD2 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 AL513124.1-201ENST00000450410 614 ntBASIC5.07□□□□□ -1.6
SCG3Q8WXD2 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 AL445433.1-201ENST00000457507 257 ntBASIC5.07□□□□□ -1.6
SCG3Q8WXD2 AC087190.1-201ENST00000484462 480 ntBASIC5.07□□□□□ -1.6
SCG3Q8WXD2 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 AC107032.1-201ENST00000485945 480 ntBASIC5.07□□□□□ -1.6
SCG3Q8WXD2 AL359273.1-201ENST00000510918 627 ntBASIC5.07□□□□□ -1.6
SCG3Q8WXD2 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 HMGB1P14-201ENST00000557424 591 ntBASIC5.07□□□□□ -1.6
SCG3Q8WXD2 AC104581.2-201ENST00000572227 430 ntBASIC5.07□□□□□ -1.6
SCG3Q8WXD2 AC005046.1-201ENST00000608515 625 ntBASIC5.07□□□□□ -1.6
SCG3Q8WXD2 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 LINC01355-201ENST00000566551 5444 ntBASIC5.07□□□□□ -1.6
SCG3Q8WXD2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.07□□□□□ -1.6
SCG3Q8WXD2 SALL4P2-201ENST00000423288 2910 ntBASIC5.07□□□□□ -1.6
SCG3Q8WXD2 AC025031.4-201ENST00000621248 3271 ntBASIC5.06□□□□□ -1.6
SCG3Q8WXD2 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SCG3Q8WXD2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCG3Q8WXD2 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCG3Q8WXD2 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SCG3Q8WXD2 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SCG3Q8WXD2 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCG3Q8WXD2 AC107068.1-201ENST00000563286 4218 ntBASIC5.06□□□□□ -1.6
SCG3Q8WXD2 AL356489.2-201ENST00000566968 3528 ntBASIC5.06□□□□□ -1.6
SCG3Q8WXD2 RNA5SP455-201ENST00000365190 119 ntBASIC5.06□□□□□ -1.6
SCG3Q8WXD2 Y_RNA.352-201ENST00000365439 102 ntBASIC5.06□□□□□ -1.6
SCG3Q8WXD2 MIR34A-201ENST00000385130 110 ntBASIC5.06□□□□□ -1.6
SCG3Q8WXD2 SNORA12.2-201ENST00000391040 156 ntBASIC5.06□□□□□ -1.6
SCG3Q8WXD2 SNORA40C-201ENST00000391285 128 ntBASIC5.06□□□□□ -1.6
SCG3Q8WXD2 SNORD58.1-201ENST00000391313 66 ntBASIC5.06□□□□□ -1.6
SCG3Q8WXD2 AL356867.1-201ENST00000429623 299 ntBASIC5.06□□□□□ -1.6
SCG3Q8WXD2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.06□□□□□ -1.6
SCG3Q8WXD2 RPS29P27-201ENST00000463711 170 ntBASIC5.06□□□□□ -1.6
SCG3Q8WXD2 AC083982.1-201ENST00000485679 344 ntBASIC5.06□□□□□ -1.6
SCG3Q8WXD2 RNU6-406P-201ENST00000516470 107 ntBASIC5.06□□□□□ -1.6
SCG3Q8WXD2 RNU6-1256P-201ENST00000516539 103 ntBASIC5.06□□□□□ -1.6
SCG3Q8WXD2 RNA5SP290-201ENST00000517133 127 ntBASIC5.06□□□□□ -1.6
SCG3Q8WXD2 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.06□□□□□ -1.6
SCG3Q8WXD2 AC005476.1-201ENST00000554427 397 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms