Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 RPL21P93-201ENST00000480465 489 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AC006517.1-201ENST00000480485 328 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AC106872.2-201ENST00000494303 480 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AC026784.1-201ENST00000507986 352 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AC005798.1-201ENST00000513715 387 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-1092P-201ENST00000516955 87 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AC090136.1-201ENST00000520009 240 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AC022634.1-201ENST00000520765 532 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 OR11H5P-201ENST00000554039 926 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 Z82243.1-201ENST00000609432 473 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AC006329.2-201ENST00000611491 394 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AC093838.1-201ENST00000613014 469 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AC007823.1-201ENST00000569932 1566 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 MFSD8-236ENST00000641509 4050 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 Y_RNA.31-201ENST00000362574 102 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 RNVU1-3-201ENST00000364313 161 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 Y_RNA.445-201ENST00000384168 102 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 AL109755.1-201ENST00000401791 649 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-370P-201ENST00000411008 104 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 RPL7P46-201ENST00000425129 740 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 SKA2P1-201ENST00000425592 390 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 AC093106.2-201ENST00000428212 385 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 RPL7P28-201ENST00000437739 740 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 RPL32P28-201ENST00000443577 397 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 GAPDHP27-201ENST00000447427 1020 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 RPL37P6-202ENST00000464216 403 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 HIGD1AP3-201ENST00000515857 278 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-1046P-201ENST00000516538 107 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 AC100870.1-201ENST00000522035 505 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 DEFB108D-201ENST00000527787 222 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 IMMP1LP2-201ENST00000552954 492 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 AL360157.1-201ENST00000565962 87 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 MIR4512-201ENST00000583257 77 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 MIR3672-201ENST00000584290 82 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 AC106900.2-201ENST00000604994 317 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 AL121655.1-201ENST00000605811 308 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 HMGB1P50-201ENST00000605814 607 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 SNORA62.6-201ENST00000606322 83 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 AC244517.12-201ENST00000623581 663 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 AL365440.1-201ENST00000436135 2167 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 AL136964.1-201ENST00000622038 2990 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 ZNF962P-201ENST00000443465 3140 ntBASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SLC44A3Q8N4M1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 EXOC5P1-201ENST00000510543 1969 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 AC090229.1-201ENST00000590983 1609 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 SNORD113-7-201ENST00000363762 77 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 Y_RNA.197-201ENST00000364004 102 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 SNORA22B-201ENST00000383876 138 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 RNU2-47P-201ENST00000410649 186 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 RNU4-46P-201ENST00000410818 138 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 RNA5SP120-201ENST00000410900 112 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-516P-201ENST00000411381 104 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 BX842559.1-201ENST00000419615 532 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 RPL21P112-201ENST00000434403 463 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 RPL35AP22-201ENST00000436855 335 ntBASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC44A3Q8N4M1 AL137792.2-201ENST00000443484 235 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms