Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 RNA5SP196-201ENST00000625967 102 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 MFSD8-233ENST00000641482 4860 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 AC008568.2-201ENST00000623862 2313 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SHFQ7M4L6 TPTE2P4-201ENST00000258589 1605 ntBASIC3.15□□□□□ -1.9
SHFQ7M4L6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SHFQ7M4L6 UBE2L2-201ENST00000254302 429 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 RNU1-75P-201ENST00000347264 129 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.15□□□□□ -1.91
SHFQ7M4L6 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.91
SHFQ7M4L6 MT-TL1-201ENST00000386347 75 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SHFQ7M4L6 SNORD37.1-201ENST00000390968 65 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 CISD1P1-201ENST00000393907 327 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 AC138393.2-201ENST00000414742 246 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 BTF3L4P3-201ENST00000418879 476 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 DBIP2-201ENST00000419076 262 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.15□□□□□ -1.91
SHFQ7M4L6 UBE2D3P2-201ENST00000424409 445 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.15□□□□□ -1.91
SHFQ7M4L6 TAAR7P-201ENST00000436141 242 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 MTND4P25-201ENST00000441039 533 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.15□□□□□ -1.91
SHFQ7M4L6 MTND3P16-201ENST00000452205 344 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.15□□□□□ -1.91
SHFQ7M4L6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.15□□□□□ -1.91
SHFQ7M4L6 RPS4XP13-201ENST00000483219 789 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 MTCYBP18-201ENST00000501056 747 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 RPL38P4-201ENST00000502376 214 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.15□□□□□ -1.91
SHFQ7M4L6 RNU4-29P-201ENST00000515943 174 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 SNORA70.18-201ENST00000516696 98 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 SNORA70.19-201ENST00000516717 90 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 AC007991.1-201ENST00000522680 631 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.15□□□□□ -1.91
SHFQ7M4L6 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.15□□□□□ -1.91
SHFQ7M4L6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.15□□□□□ -1.91
SHFQ7M4L6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.15□□□□□ -1.91
SHFQ7M4L6 MIR5583-1-201ENST00000580941 59 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 AC098826.3-201ENST00000603823 466 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
SHFQ7M4L6 AL359547.2-201ENST00000615810 418 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.15□□□□□ -1.91
SHFQ7M4L6 AC119674.1-207ENST00000641355 633 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 AC007496.3-201ENST00000624987 3443 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 OR4G1P-203ENST00000641984 1631 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.15□□□□□ -1.91
SHFQ7M4L6 AP001148.1-201ENST00000624124 2359 ntBASIC3.15□□□□□ -1.91
SHFQ7M4L6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.15□□□□□ -1.91
SHFQ7M4L6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHFQ7M4L6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHFQ7M4L6 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHFQ7M4L6 FRG1CP-201ENST00000358464 769 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 SNORA70.2-201ENST00000364506 135 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHFQ7M4L6 AC068538.1-201ENST00000376856 336 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 RNU6-116P-201ENST00000384042 109 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 MIR514A2-201ENST00000385131 88 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 MIR514A3-201ENST00000385132 88 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 RNU6-876P-201ENST00000391295 104 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 AL356776.1-201ENST00000406574 447 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 AL606923.1-201ENST00000406616 190 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 RNA5SP118-201ENST00000410385 109 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 RNU4-46P-201ENST00000410818 138 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 RN7SKP53-201ENST00000411337 315 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 BX842559.1-201ENST00000419615 532 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 CALM2P2-201ENST00000428512 440 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 RPS24P13-201ENST00000442520 397 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 AC009220.1-201ENST00000451614 275 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 SNRPFP3-201ENST00000457792 225 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 RPL21P104-201ENST00000464143 478 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 RPL21P8-201ENST00000465083 535 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 RPL23AP67-201ENST00000465341 474 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 RPL39P36-201ENST00000490784 156 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 CEACAMP10-202ENST00000495431 496 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHFQ7M4L6 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 APOOP4-201ENST00000513530 597 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 SNORA20.3-201ENST00000516880 132 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 IGHV3-76-201ENST00000522465 295 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 PSMA2P1-201ENST00000526365 646 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.14□□□□□ -1.91
SHFQ7M4L6 AL121579.1-201ENST00000555129 305 ntBASIC3.14□□□□□ -1.91
SHFQ7M4L6 PARP1P2-201ENST00000556806 195 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms