Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 AC137499.1-201ENST00000427602 88 ntBASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 MTND1P26-201ENST00000440488 538 ntBASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 TAF9P1-201ENST00000445421 515 ntBASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 TAF9P2-201ENST00000454958 515 ntBASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 AL590639.1-201ENST00000456484 337 ntBASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 RPL37P6-201ENST00000460682 294 ntBASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 AC138853.1-201ENST00000503549 823 ntBASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 ARL4AP2-201ENST00000507378 601 ntBASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 AL136363.1-201ENST00000605349 337 ntBASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 FTX_3.1-201ENST00000610451 147 ntBASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 AC004852.3-201ENST00000614131 326 ntBASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 AL161629.2-201ENST00000615347 275 ntBASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 MIR6852-201ENST00000621699 66 ntBASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 AC092435.3-201ENST00000565538 3654 ntBASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC30Q5VVM6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CCDC30Q5VVM6 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 RNU6-1167P-201ENST00000363227 94 ntBASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 RNU6-1027P-201ENST00000383998 107 ntBASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 SNORA26.8-201ENST00000391306 124 ntBASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 NDUFS5P1-201ENST00000405668 289 ntBASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 NPM1P11-201ENST00000417106 855 ntBASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 SEPT2P1-201ENST00000419651 180 ntBASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 AL109933.2-201ENST00000452651 260 ntBASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 RNU7-23P-201ENST00000459465 62 ntBASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 RN7SL432P-201ENST00000484057 298 ntBASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 RNA5SP290-201ENST00000517133 127 ntBASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 MTND2P38-201ENST00000522536 667 ntBASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 RPL21P5-201ENST00000554662 472 ntBASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 Z99497.2-201ENST00000603634 310 ntBASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 AC006023.1-201ENST00000603944 259 ntBASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 AP000860.1-201ENST00000605250 559 ntBASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 MTND5P29-201ENST00000458676 1807 ntBASIC3.46□□□□□ -1.86
CCDC30Q5VVM6 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 RNU6-859P-201ENST00000362728 107 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 Y_RNA.245-201ENST00000364493 95 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 CD24P4-201ENST00000382840 243 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 AL356057.3-201ENST00000402607 340 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 RNU2-8P-201ENST00000410727 190 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 ELOCP14-201ENST00000428070 331 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 HMGB1P27-201ENST00000431429 603 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 ELOCP7-201ENST00000439968 331 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 COX6CP2-201ENST00000444980 225 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 AP000936.2-201ENST00000447151 681 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 RNA5SP269-201ENST00000459032 137 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 SNORA59A-201ENST00000459326 152 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 AC087373.1-201ENST00000524920 491 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 AP006587.4-201ENST00000526053 529 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 AP003122.4-201ENST00000530980 758 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 AC068135.2-201ENST00000569293 1028 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 MIR3162-201ENST00000581818 82 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 DPPA3P3-201ENST00000603842 430 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 Z94722.1-201ENST00000604328 474 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 AC107294.1-201ENST00000609524 467 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 AC006338.1-201ENST00000618453 749 ntBASIC3.45□□□□□ -1.86
CCDC30Q5VVM6 MIR3974-201ENST00000637126 96 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms