Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.85□□□□□ -1.95
GABPAQ06546 MTND1P30-201ENST00000441241 901 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
GABPAQ06546 EPS15P1-201ENST00000448836 336 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.85□□□□□ -1.95
GABPAQ06546 AC108059.3-201ENST00000456388 214 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 RNU6-420P-201ENST00000458780 107 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 snoU13.28-201ENST00000459235 104 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 AC104472.2-201ENST00000469035 601 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 TRBV12-1-201ENST00000479785 344 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 LARP1BP2-201ENST00000486594 519 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.85□□□□□ -1.95
GABPAQ06546 MTND1P22-201ENST00000510572 951 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 AP002748.2-201ENST00000528671 348 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 DEFB108A-201ENST00000530110 222 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 AC007115.1-201ENST00000546853 234 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.85□□□□□ -1.95
GABPAQ06546 AC093012.1-202ENST00000549403 582 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.85□□□□□ -1.95
GABPAQ06546 AC090888.1-201ENST00000561335 1141 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.85□□□□□ -1.95
GABPAQ06546 AL391813.2-201ENST00000609113 322 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 BX664608.1-201ENST00000610519 487 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 AC009159.1-201ENST00000618386 642 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.85□□□□□ -1.95
GABPAQ06546 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
GABPAQ06546 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
GABPAQ06546 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
GABPAQ06546 AL049641.1-201ENST00000441055 1948 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
GABPAQ06546 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
GABPAQ06546 RNU5A-8P-201ENST00000364102 114 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 SNORA70B-201ENST00000384210 135 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 AF228730.1-201ENST00000397972 663 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 Z98742.3-201ENST00000418637 326 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 AL451054.2-201ENST00000420896 202 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.84□□□□□ -1.95
GABPAQ06546 AC104332.2-201ENST00000429959 156 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.84□□□□□ -1.95
GABPAQ06546 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.84□□□□□ -1.95
GABPAQ06546 TIMM9P1-201ENST00000436122 256 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.84□□□□□ -1.95
GABPAQ06546 PIGFP3-201ENST00000441918 722 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 BMI1P1-201ENST00000445879 941 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.84□□□□□ -1.95
GABPAQ06546 AC010099.1-201ENST00000455434 375 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.84□□□□□ -1.95
GABPAQ06546 AL135752.1-201ENST00000479477 471 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 AC026436.1-201ENST00000510537 270 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 RNU6-1282P-201ENST00000516735 96 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.84□□□□□ -1.95
GABPAQ06546 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.84□□□□□ -1.95
GABPAQ06546 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.84□□□□□ -1.95
GABPAQ06546 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.84□□□□□ -1.95
GABPAQ06546 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.84□□□□□ -1.95
GABPAQ06546 AC109446.2-201ENST00000567872 497 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 KC877982.1-201ENST00000602313 470 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 AC007938.3-201ENST00000604965 623 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.84□□□□□ -1.95
GABPAQ06546 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.84□□□□□ -1.95
GABPAQ06546 AC091931.1-201ENST00000623488 728 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 AC090617.7-201ENST00000623952 126 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 AC097520.1-201ENST00000624435 385 ntBASIC2.84□□□□□ -1.95
GABPAQ06546 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.84□□□□□ -1.95
GABPAQ06546 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
GABPAQ06546 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
GABPAQ06546 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
GABPAQ06546 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.83□□□□□ -1.96
GABPAQ06546 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.83□□□□□ -1.96
GABPAQ06546 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
GABPAQ06546 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
GABPAQ06546 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
GABPAQ06546 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
GABPAQ06546 CD24P4-201ENST00000382840 243 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 AL049545.1-201ENST00000401856 572 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 AL513331.1-201ENST00000411908 397 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 AC107081.1-201ENST00000414975 361 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 BTF3L4P3-201ENST00000418879 476 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 Z99497.1-201ENST00000421282 135 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.83□□□□□ -1.96
GABPAQ06546 AC092447.3-201ENST00000426027 686 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.83□□□□□ -1.96
GABPAQ06546 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.83□□□□□ -1.96
GABPAQ06546 MTATP6P30-201ENST00000443540 664 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 DDX3P2-201ENST00000446138 111 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 AL590365.1-201ENST00000450788 243 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.83□□□□□ -1.96
GABPAQ06546 AC112204.1-201ENST00000502591 103 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.83□□□□□ -1.96
GABPAQ06546 RNU6-201P-201ENST00000517100 61 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 RNA5SP291-201ENST00000517222 105 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 AC106038.2-201ENST00000520706 568 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.83□□□□□ -1.96
GABPAQ06546 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.83□□□□□ -1.96
GABPAQ06546 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.83□□□□□ -1.96
GABPAQ06546 MIR3915-201ENST00000578518 97 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 MIR3146-201ENST00000580367 79 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 AC023043.3-201ENST00000593113 385 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 AC078899.3-201ENST00000599065 212 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms