Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.55□□□□□ -2.16
H3F3AP84243 RPL23AP6-201ENST00000446637 472 ntBASIC1.55□□□□□ -2.16
H3F3AP84243 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.55□□□□□ -2.16
H3F3AP84243 RPS20P22-201ENST00000473700 357 ntBASIC1.55□□□□□ -2.16
H3F3AP84243 AC104564.1-201ENST00000493028 407 ntBASIC1.55□□□□□ -2.16
H3F3AP84243 BOLA3P3-201ENST00000505182 232 ntBASIC1.55□□□□□ -2.16
H3F3AP84243 AC116337.1-201ENST00000509680 687 ntBASIC1.55□□□□□ -2.16
H3F3AP84243 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.55□□□□□ -2.16
H3F3AP84243 MIR3618-201ENST00000580330 88 ntBASIC1.55□□□□□ -2.16
H3F3AP84243 MIR3683-201ENST00000580847 82 ntBASIC1.55□□□□□ -2.16
H3F3AP84243 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.55□□□□□ -2.16
H3F3AP84243 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.55□□□□□ -2.16
H3F3AP84243 AC002545.1-201ENST00000592511 181 ntBASIC1.55□□□□□ -2.16
H3F3AP84243 AC011494.1-201ENST00000596454 237 ntBASIC1.55□□□□□ -2.16
H3F3AP84243 AC243960.4-201ENST00000600532 288 ntBASIC1.55□□□□□ -2.16
H3F3AP84243 AC116312.1-201ENST00000606841 314 ntBASIC1.55□□□□□ -2.16
H3F3AP84243 AL158211.4-201ENST00000606988 584 ntBASIC1.55□□□□□ -2.16
H3F3AP84243 AC007038.2-201ENST00000608095 740 ntBASIC1.55□□□□□ -2.16
H3F3AP84243 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.55□□□□□ -2.16
H3F3AP84243 AC084768.2-201ENST00000622736 221 ntBASIC1.55□□□□□ -2.16
H3F3AP84243 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.55□□□□□ -2.16
H3F3AP84243 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
H3F3AP84243 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.54□□□□□ -2.16
H3F3AP84243 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.54□□□□□ -2.16
H3F3AP84243 RNU6-1066P-201ENST00000363573 105 ntBASIC1.54□□□□□ -2.16
H3F3AP84243 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
H3F3AP84243 RNU2-63P-201ENST00000410792 194 ntBASIC1.54□□□□□ -2.16
H3F3AP84243 RNU6-575P-201ENST00000411326 105 ntBASIC1.54□□□□□ -2.16
H3F3AP84243 RPS20P15-201ENST00000412792 311 ntBASIC1.54□□□□□ -2.16
H3F3AP84243 AL592310.1-201ENST00000414330 671 ntBASIC1.54□□□□□ -2.16
H3F3AP84243 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.54□□□□□ -2.16
H3F3AP84243 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.54□□□□□ -2.16
H3F3AP84243 GTF2IP7-202ENST00000436677 309 ntBASIC1.54□□□□□ -2.16
H3F3AP84243 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.54□□□□□ -2.16
H3F3AP84243 AC098831.1-201ENST00000440661 216 ntBASIC1.54□□□□□ -2.16
H3F3AP84243 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.54□□□□□ -2.16
H3F3AP84243 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.54□□□□□ -2.16
H3F3AP84243 OFD1P3Y-201ENST00000453312 783 ntBASIC1.54□□□□□ -2.16
H3F3AP84243 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.54□□□□□ -2.16
H3F3AP84243 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.54□□□□□ -2.16
H3F3AP84243 SNORA31.23-201ENST00000517219 133 ntBASIC1.54□□□□□ -2.16
H3F3AP84243 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.54□□□□□ -2.16
H3F3AP84243 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.54□□□□□ -2.16
H3F3AP84243 ADAM3B-201ENST00000569937 840 ntBASIC1.54□□□□□ -2.16
H3F3AP84243 AC104581.2-201ENST00000572227 430 ntBASIC1.54□□□□□ -2.16
H3F3AP84243 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.54□□□□□ -2.16
H3F3AP84243 MIR4298-201ENST00000584380 73 ntBASIC1.54□□□□□ -2.16
H3F3AP84243 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
H3F3AP84243 AC011451.2-201ENST00000604303 598 ntBASIC1.54□□□□□ -2.16
H3F3AP84243 AC016911.1-201ENST00000613297 452 ntBASIC1.54□□□□□ -2.16
H3F3AP84243 AC013476.2-201ENST00000614456 459 ntBASIC1.54□□□□□ -2.16
H3F3AP84243 MIR4275-201ENST00000636486 87 ntBASIC1.54□□□□□ -2.16
H3F3AP84243 AC241585.2-209ENST00000638217 143 ntBASIC1.54□□□□□ -2.16
H3F3AP84243 AL390862.1-201ENST00000635467 1469 ntBASIC1.54□□□□□ -2.16
H3F3AP84243 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.16
H3F3AP84243 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
H3F3AP84243 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.54□□□□□ -2.16
H3F3AP84243 RNU6-486P-201ENST00000363116 107 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 RNU6-353P-201ENST00000364266 108 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 U3.13-201ENST00000364804 214 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 RNU6-883P-201ENST00000384597 107 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 MIR147B-201ENST00000390185 80 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 SNRPEP2-201ENST00000397592 279 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 SNORD56-201ENST00000413522 71 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 CYCSP49-201ENST00000420810 319 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.53□□□□□ -2.16
H3F3AP84243 ZYG11AP1-201ENST00000430329 837 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.53□□□□□ -2.16
H3F3AP84243 AC026410.2-201ENST00000460281 156 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.53□□□□□ -2.16
H3F3AP84243 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.53□□□□□ -2.16
H3F3AP84243 RPL23AP63-201ENST00000498752 471 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 AC107953.1-201ENST00000522216 297 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 AP005639.2-201ENST00000527592 928 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
H3F3AP84243 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.53□□□□□ -2.16
H3F3AP84243 AC098826.3-201ENST00000603823 466 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 AL121652.1-201ENST00000608851 448 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 AC022202.1-201ENST00000613515 211 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 AL359854.1-201ENST00000614203 1594 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 AC012150.2-201ENST00000621300 544 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 HPVC1-201ENST00000629899 1198 ntBASIC1.53□□□□□ -2.16
H3F3AP84243 AC103710.2-202ENST00000641454 2853 ntBASIC1.53□□□□□ -2.17
H3F3AP84243 AC002543.1-201ENST00000299783 1954 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
H3F3AP84243 RNU1-39P-201ENST00000383897 165 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 RNU6-481P-201ENST00000384194 107 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 MIR217-201ENST00000384817 110 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 HMGN2P39-201ENST00000398005 273 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 USP9YP19-201ENST00000412165 485 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 NDUFS5P4-201ENST00000412983 318 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 USP9YP13-201ENST00000417797 480 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.52□□□□□ -2.17
H3F3AP84243 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.52□□□□□ -2.17
H3F3AP84243 IFNA20P-201ENST00000436840 528 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 AL691517.1-201ENST00000440833 1235 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 AC009238.1-201ENST00000442165 424 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 AC009237.6-201ENST00000446969 424 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.52□□□□□ -2.17
H3F3AP84243 PPP1R2P5-201ENST00000457256 603 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms