Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 MTCYBP20-201ENST00000524239 1129 ntBASIC3.2□□□□□ -1.9
RPS3AP61247 AP003122.3-201ENST00000526316 255 ntBASIC3.2□□□□□ -1.9
RPS3AP61247 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.2□□□□□ -1.9
RPS3AP61247 AC084851.1-201ENST00000529105 249 ntBASIC3.2□□□□□ -1.9
RPS3AP61247 OR5B10P-201ENST00000532869 642 ntBASIC3.2□□□□□ -1.9
RPS3AP61247 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.2□□□□□ -1.9
RPS3AP61247 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.2□□□□□ -1.9
RPS3AP61247 AL133393.1-201ENST00000603277 287 ntBASIC3.2□□□□□ -1.9
RPS3AP61247 AC012468.1-201ENST00000604888 430 ntBASIC3.2□□□□□ -1.9
RPS3AP61247 Z84480.1-201ENST00000605131 311 ntBASIC3.2□□□□□ -1.9
RPS3AP61247 MIR15A-201ENST00000607334 83 ntBASIC3.2□□□□□ -1.9
RPS3AP61247 AC093648.1-201ENST00000623546 606 ntBASIC3.2□□□□□ -1.9
RPS3AP61247 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPS3AP61247 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RPS3AP61247 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPS3AP61247 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.2□□□□□ -1.9
RPS3AP61247 AC093831.2-201ENST00000624393 3427 ntBASIC3.2□□□□□ -1.9
RPS3AP61247 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.2□□□□□ -1.9
RPS3AP61247 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.2□□□□□ -1.9
RPS3AP61247 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RPS3AP61247 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPS3AP61247 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.2□□□□□ -1.9
RPS3AP61247 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.19□□□□□ -1.9
RPS3AP61247 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPS3AP61247 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
RPS3AP61247 RNU6-778P-201ENST00000363269 103 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 RNU1-105P-201ENST00000363470 161 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 RNA5SP50-201ENST00000363731 107 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 Y_RNA.296-201ENST00000364930 108 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 RNU6-1103P-201ENST00000384150 107 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 MIR454-201ENST00000390180 115 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 GSTA9P-201ENST00000406231 611 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 U3.39-201ENST00000408569 239 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 RNU2-66P-201ENST00000410650 161 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.19□□□□□ -1.9
RPS3AP61247 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.19□□□□□ -1.9
RPS3AP61247 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.19□□□□□ -1.9
RPS3AP61247 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.19□□□□□ -1.9
RPS3AP61247 AC010975.2-201ENST00000427781 588 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.19□□□□□ -1.9
RPS3AP61247 AC244505.4-201ENST00000434905 287 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 SSXP5-201ENST00000443473 287 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 CYCSP35-201ENST00000451978 304 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.19□□□□□ -1.9
RPS3AP61247 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.19□□□□□ -1.9
RPS3AP61247 AC126182.1-201ENST00000478134 357 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 AC026801.1-201ENST00000497178 464 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 HMGB1P29-201ENST00000505659 499 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 RNU1-103P-201ENST00000516502 125 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 RNU6-1315P-201ENST00000517187 99 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.19□□□□□ -1.9
RPS3AP61247 OR4R1P-201ENST00000529879 463 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 SUB1P2-201ENST00000556401 297 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.19□□□□□ -1.9
RPS3AP61247 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.19□□□□□ -1.9
RPS3AP61247 AC009063.1-201ENST00000563342 702 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 AC010546.1-201ENST00000569391 485 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.19□□□□□ -1.9
RPS3AP61247 MIR4444-1-201ENST00000581696 74 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 MIR4444-2-201ENST00000584390 74 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 HMGN2P15-201ENST00000585707 270 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.19□□□□□ -1.9
RPS3AP61247 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.19□□□□□ -1.9
RPS3AP61247 MTND4LP5-201ENST00000605152 292 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 AC084757.4-201ENST00000616350 526 ntBASIC3.19□□□□□ -1.9
RPS3AP61247 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.19□□□□□ -1.9
RPS3AP61247 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RPS3AP61247 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
RPS3AP61247 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RPS3AP61247 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPS3AP61247 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RPS3AP61247 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RPS3AP61247 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPS3AP61247 MFSD8-233ENST00000641482 4860 ntBASIC3.18□□□□□ -1.9
RPS3AP61247 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RPS3AP61247 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RPS3AP61247 RNA5SP119-201ENST00000362715 117 ntBASIC3.18□□□□□ -1.9
RPS3AP61247 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.18□□□□□ -1.9
RPS3AP61247 MIR1-2-201ENST00000384961 85 ntBASIC3.18□□□□□ -1.9
RPS3AP61247 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.18□□□□□ -1.9
RPS3AP61247 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.18□□□□□ -1.9
RPS3AP61247 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.18□□□□□ -1.9
RPS3AP61247 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.18□□□□□ -1.9
RPS3AP61247 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.18□□□□□ -1.9
RPS3AP61247 SKA2P1-201ENST00000425592 390 ntBASIC3.18□□□□□ -1.9
RPS3AP61247 CALM2P2-201ENST00000428512 440 ntBASIC3.18□□□□□ -1.9
RPS3AP61247 YME1L1P1-201ENST00000429435 297 ntBASIC3.18□□□□□ -1.9
RPS3AP61247 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.18□□□□□ -1.9
RPS3AP61247 AC008264.1-201ENST00000447612 367 ntBASIC3.18□□□□□ -1.9
RPS3AP61247 AL358232.1-201ENST00000448030 501 ntBASIC3.18□□□□□ -1.9
RPS3AP61247 MTATP6P7-201ENST00000453315 681 ntBASIC3.18□□□□□ -1.9
RPS3AP61247 RPL36AP51-201ENST00000487216 318 ntBASIC3.18□□□□□ -1.9
RPS3AP61247 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.18□□□□□ -1.9
RPS3AP61247 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.18□□□□□ -1.9
RPS3AP61247 SUMO2P6-201ENST00000505273 288 ntBASIC3.18□□□□□ -1.9
RPS3AP61247 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.18□□□□□ -1.9
RPS3AP61247 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.18□□□□□ -1.9
RPS3AP61247 RNU6-703P-201ENST00000516946 107 ntBASIC3.18□□□□□ -1.9
RPS3AP61247 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.18□□□□□ -1.9
RPS3AP61247 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms