Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.15□□□□□ -2.07
CX3CR1P49238 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.15□□□□□ -2.07
CX3CR1P49238 LTV1P1-201ENST00000510683 1237 ntBASIC2.15□□□□□ -2.07
CX3CR1P49238 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.15□□□□□ -2.07
CX3CR1P49238 RN7SKP24-201ENST00000515888 284 ntBASIC2.15□□□□□ -2.07
CX3CR1P49238 RNA5SP320-201ENST00000516263 124 ntBASIC2.15□□□□□ -2.07
CX3CR1P49238 RNU5A-4P-201ENST00000516588 111 ntBASIC2.15□□□□□ -2.07
CX3CR1P49238 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.15□□□□□ -2.07
CX3CR1P49238 AC136618.2-201ENST00000575091 400 ntBASIC2.15□□□□□ -2.07
CX3CR1P49238 MIR4319-201ENST00000577285 85 ntBASIC2.15□□□□□ -2.07
CX3CR1P49238 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.15□□□□□ -2.07
CX3CR1P49238 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.15□□□□□ -2.07
CX3CR1P49238 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.15□□□□□ -2.07
CX3CR1P49238 AL161798.1-201ENST00000604630 131 ntBASIC2.15□□□□□ -2.07
CX3CR1P49238 AC097468.3-201ENST00000607956 456 ntBASIC2.15□□□□□ -2.07
CX3CR1P49238 AC007038.2-201ENST00000608095 740 ntBASIC2.15□□□□□ -2.07
CX3CR1P49238 AC004908.2-201ENST00000609090 574 ntBASIC2.15□□□□□ -2.07
CX3CR1P49238 AC012150.2-201ENST00000621300 544 ntBASIC2.15□□□□□ -2.07
CX3CR1P49238 AC007998.5-201ENST00000622938 237 ntBASIC2.15□□□□□ -2.07
CX3CR1P49238 AC079416.3-201ENST00000624479 549 ntBASIC2.15□□□□□ -2.07
CX3CR1P49238 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.15□□□□□ -2.07
CX3CR1P49238 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CX3CR1P49238 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CX3CR1P49238 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
CX3CR1P49238 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.14□□□□□ -2.07
CX3CR1P49238 RNU6-462P-201ENST00000362659 105 ntBASIC2.14□□□□□ -2.07
CX3CR1P49238 RNU6-931P-201ENST00000363850 107 ntBASIC2.14□□□□□ -2.07
CX3CR1P49238 SNORA41-201ENST00000384675 132 ntBASIC2.14□□□□□ -2.07
CX3CR1P49238 MIR19A-201ENST00000384878 82 ntBASIC2.14□□□□□ -2.07
CX3CR1P49238 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.14□□□□□ -2.07
CX3CR1P49238 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.14□□□□□ -2.07
CX3CR1P49238 AL109913.1-201ENST00000421173 514 ntBASIC2.14□□□□□ -2.07
CX3CR1P49238 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.14□□□□□ -2.07
CX3CR1P49238 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.14□□□□□ -2.07
CX3CR1P49238 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.14□□□□□ -2.07
CX3CR1P49238 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.14□□□□□ -2.07
CX3CR1P49238 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.14□□□□□ -2.07
CX3CR1P49238 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.14□□□□□ -2.07
CX3CR1P49238 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.14□□□□□ -2.07
CX3CR1P49238 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.14□□□□□ -2.07
CX3CR1P49238 VN1R82P-201ENST00000601481 356 ntBASIC2.14□□□□□ -2.07
CX3CR1P49238 AL391813.1-201ENST00000603098 260 ntBASIC2.14□□□□□ -2.07
CX3CR1P49238 AC008121.1-201ENST00000603244 268 ntBASIC2.14□□□□□ -2.07
CX3CR1P49238 AC098826.3-201ENST00000603823 466 ntBASIC2.14□□□□□ -2.07
CX3CR1P49238 AL033523.1-201ENST00000605153 153 ntBASIC2.14□□□□□ -2.07
CX3CR1P49238 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CX3CR1P49238 AC005332.10-201ENST00000612725 619 ntBASIC2.14□□□□□ -2.07
CX3CR1P49238 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.14□□□□□ -2.07
CX3CR1P49238 AL607023.1-201ENST00000620045 248 ntBASIC2.14□□□□□ -2.07
CX3CR1P49238 U4.3-201ENST00000621047 82 ntBASIC2.14□□□□□ -2.07
CX3CR1P49238 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.14□□□□□ -2.07
CX3CR1P49238 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.14□□□□□ -2.07
CX3CR1P49238 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CX3CR1P49238 AL391994.1-201ENST00000254724 282 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 AC062016.1-201ENST00000355719 319 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 SNORA72.3-201ENST00000365074 132 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 RNU6-723P-201ENST00000383973 107 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 RN7SKP266-201ENST00000410232 287 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 AF274854.1-201ENST00000413236 615 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 RPL17P12-201ENST00000413391 526 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 RPL26P27-201ENST00000414397 437 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 MTND1P20-201ENST00000430341 950 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 GPM6BP2-201ENST00000432046 144 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.13□□□□□ -2.07
CX3CR1P49238 RPL23AP83-201ENST00000434984 473 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 FAM103A2P-201ENST00000444122 354 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 GPM6BP1-201ENST00000446387 144 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 Z73417.1-201ENST00000447373 778 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 AL139109.1-201ENST00000455491 297 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 RNU7-59P-201ENST00000459101 61 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 GZMAP1-201ENST00000503054 631 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 RNA5SP356-201ENST00000515972 94 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 RNA5SP216-201ENST00000516111 123 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 RN7SKP258-201ENST00000517151 304 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 AC010186.2-204ENST00000537668 439 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.13□□□□□ -2.07
CX3CR1P49238 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.13□□□□□ -2.07
CX3CR1P49238 EIF4BP1-201ENST00000554881 351 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.13□□□□□ -2.07
CX3CR1P49238 AC021739.1-201ENST00000559631 174 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.13□□□□□ -2.07
CX3CR1P49238 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.13□□□□□ -2.07
CX3CR1P49238 MIR5571-201ENST00000577998 113 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 MIR544B-201ENST00000582372 78 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.13□□□□□ -2.07
CX3CR1P49238 AC025588.2-201ENST00000604851 466 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CX3CR1P49238 AL021997.1-201ENST00000605757 193 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.13□□□□□ -2.07
CX3CR1P49238 AC025594.3-201ENST00000613068 790 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 AC011890.2-201ENST00000613393 294 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 AP002791.1-201ENST00000623291 381 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 AL365361.1-201ENST00000566942 3481 ntBASIC2.13□□□□□ -2.07
CX3CR1P49238 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.13□□□□□ -2.07
CX3CR1P49238 MTND4P16-201ENST00000466108 1367 ntBASIC2.12□□□□□ -2.07
CX3CR1P49238 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CX3CR1P49238 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CX3CR1P49238 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CX3CR1P49238 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms