Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AL359880.1-201ENST00000621879 266 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
TM4SF4P48230 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.82□□□□□ -1.8
TM4SF4P48230 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
TM4SF4P48230 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
TM4SF4P48230 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TM4SF4P48230 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TM4SF4P48230 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.81□□□□□ -1.8
TM4SF4P48230 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
TM4SF4P48230 ZNF680P1-201ENST00000436625 1469 ntBASIC3.81□□□□□ -1.8
TM4SF4P48230 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TM4SF4P48230 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TM4SF4P48230 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TM4SF4P48230 RNU6-512P-201ENST00000364438 103 ntBASIC3.81□□□□□ -1.8
TM4SF4P48230 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.81□□□□□ -1.8
TM4SF4P48230 MIR181A1-201ENST00000385026 110 ntBASIC3.81□□□□□ -1.8
TM4SF4P48230 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TM4SF4P48230 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.81□□□□□ -1.8
TM4SF4P48230 RPL21P109-201ENST00000422213 475 ntBASIC3.81□□□□□ -1.8
TM4SF4P48230 AC012498.1-201ENST00000424037 437 ntBASIC3.81□□□□□ -1.8
TM4SF4P48230 MTCO2P19-201ENST00000427513 598 ntBASIC3.81□□□□□ -1.8
TM4SF4P48230 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.81□□□□□ -1.8
TM4SF4P48230 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.81□□□□□ -1.8
TM4SF4P48230 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TM4SF4P48230 Y_RNA.689-201ENST00000516589 107 ntBASIC3.81□□□□□ -1.8
TM4SF4P48230 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.81□□□□□ -1.8
TM4SF4P48230 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.81□□□□□ -1.8
TM4SF4P48230 AC136619.2-201ENST00000563361 631 ntBASIC3.81□□□□□ -1.8
TM4SF4P48230 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.81□□□□□ -1.8
TM4SF4P48230 AL391646.1-201ENST00000603860 190 ntBASIC3.81□□□□□ -1.8
TM4SF4P48230 AC025449.1-201ENST00000603896 529 ntBASIC3.81□□□□□ -1.8
TM4SF4P48230 AL161798.1-201ENST00000604630 131 ntBASIC3.81□□□□□ -1.8
TM4SF4P48230 AC022893.3-201ENST00000607665 437 ntBASIC3.81□□□□□ -1.8
TM4SF4P48230 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.81□□□□□ -1.8
TM4SF4P48230 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.81□□□□□ -1.8
TM4SF4P48230 AC130324.3-201ENST00000614165 542 ntBASIC3.81□□□□□ -1.8
TM4SF4P48230 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.81□□□□□ -1.8
TM4SF4P48230 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.81□□□□□ -1.8
TM4SF4P48230 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
TM4SF4P48230 AC005183.1-201ENST00000603687 1979 ntBASIC3.81□□□□□ -1.8
TM4SF4P48230 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
TM4SF4P48230 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.8□□□□□ -1.8
TM4SF4P48230 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.8□□□□□ -1.8
TM4SF4P48230 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TM4SF4P48230 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TM4SF4P48230 RNU6-1287P-201ENST00000362914 107 ntBASIC3.8□□□□□ -1.8
TM4SF4P48230 Y_RNA.516-201ENST00000384541 124 ntBASIC3.8□□□□□ -1.8
TM4SF4P48230 RNU6-140P-201ENST00000384566 108 ntBASIC3.8□□□□□ -1.8
TM4SF4P48230 RNU6-1060P-201ENST00000384664 107 ntBASIC3.8□□□□□ -1.8
TM4SF4P48230 MIR301A-201ENST00000385261 86 ntBASIC3.8□□□□□ -1.8
TM4SF4P48230 AC114491.1-201ENST00000416095 246 ntBASIC3.8□□□□□ -1.8
TM4SF4P48230 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.8□□□□□ -1.8
TM4SF4P48230 DPPA3P1-201ENST00000448050 469 ntBASIC3.8□□□□□ -1.8
TM4SF4P48230 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.8□□□□□ -1.8
TM4SF4P48230 AL136097.1-201ENST00000456945 913 ntBASIC3.8□□□□□ -1.8
TM4SF4P48230 AC092798.1-201ENST00000458542 409 ntBASIC3.8□□□□□ -1.8
TM4SF4P48230 AC012181.1-201ENST00000479895 423 ntBASIC3.8□□□□□ -1.8
TM4SF4P48230 OR5B19P-201ENST00000531766 928 ntBASIC3.8□□□□□ -1.8
TM4SF4P48230 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.8□□□□□ -1.8
TM4SF4P48230 AC026333.2-201ENST00000542164 106 ntBASIC3.8□□□□□ -1.8
TM4SF4P48230 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.8□□□□□ -1.8
TM4SF4P48230 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.8□□□□□ -1.8
TM4SF4P48230 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.8□□□□□ -1.8
TM4SF4P48230 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.8□□□□□ -1.8
TM4SF4P48230 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.8□□□□□ -1.8
TM4SF4P48230 AC093648.1-201ENST00000623546 606 ntBASIC3.8□□□□□ -1.8
TM4SF4P48230 AL157786.1-207ENST00000627771 695 ntBASIC3.8□□□□□ -1.8
TM4SF4P48230 AL512643.1-201ENST00000635735 524 ntBASIC3.8□□□□□ -1.8
TM4SF4P48230 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
TM4SF4P48230 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TM4SF4P48230 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TM4SF4P48230 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.8□□□□□ -1.8
TM4SF4P48230 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.8□□□□□ -1.8
TM4SF4P48230 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
TM4SF4P48230 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TM4SF4P48230 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TM4SF4P48230 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.79□□□□□ -1.8
TM4SF4P48230 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.79□□□□□ -1.8
TM4SF4P48230 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
TM4SF4P48230 AL359693.1-201ENST00000614959 2407 ntBASIC3.79□□□□□ -1.8
TM4SF4P48230 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.79□□□□□ -1.8
TM4SF4P48230 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TM4SF4P48230 Y_RNA.159-201ENST00000363674 87 ntBASIC3.79□□□□□ -1.8
TM4SF4P48230 RNU6-1322P-201ENST00000364309 107 ntBASIC3.79□□□□□ -1.8
TM4SF4P48230 SNORA7.4-201ENST00000384249 137 ntBASIC3.79□□□□□ -1.8
TM4SF4P48230 Y_RNA.619-201ENST00000410951 90 ntBASIC3.79□□□□□ -1.8
TM4SF4P48230 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.79□□□□□ -1.8
TM4SF4P48230 AL031779.1-201ENST00000415663 330 ntBASIC3.79□□□□□ -1.8
TM4SF4P48230 MRPL50P2-201ENST00000416821 482 ntBASIC3.79□□□□□ -1.8
TM4SF4P48230 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.79□□□□□ -1.8
TM4SF4P48230 RPL36AP53-201ENST00000432891 316 ntBASIC3.79□□□□□ -1.8
TM4SF4P48230 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.79□□□□□ -1.8
TM4SF4P48230 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.79□□□□□ -1.8
TM4SF4P48230 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TM4SF4P48230 MTND1P18-201ENST00000448191 573 ntBASIC3.79□□□□□ -1.8
TM4SF4P48230 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.79□□□□□ -1.8
TM4SF4P48230 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.79□□□□□ -1.8
TM4SF4P48230 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.79□□□□□ -1.8
TM4SF4P48230 RNU6-123P-201ENST00000516163 102 ntBASIC3.79□□□□□ -1.8
TM4SF4P48230 RNA5SP471-201ENST00000516971 106 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms