Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC007151.1-201ENST00000572774 483 ntBASIC3.26□□□□□ -1.89
CAPN3P20807 MIR4782-201ENST00000577987 79 ntBASIC3.26□□□□□ -1.89
CAPN3P20807 AC245014.2-201ENST00000603689 287 ntBASIC3.26□□□□□ -1.89
CAPN3P20807 AC246785.4-201ENST00000605374 287 ntBASIC3.26□□□□□ -1.89
CAPN3P20807 AL139286.2-201ENST00000606838 396 ntBASIC3.26□□□□□ -1.89
CAPN3P20807 AC109347.2-201ENST00000610220 349 ntBASIC3.26□□□□□ -1.89
CAPN3P20807 AL158063.1-201ENST00000615349 536 ntBASIC3.26□□□□□ -1.89
CAPN3P20807 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CAPN3P20807 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CAPN3P20807 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CAPN3P20807 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.25□□□□□ -1.89
CAPN3P20807 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
CAPN3P20807 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CAPN3P20807 RN7SKP142-201ENST00000411236 328 ntBASIC3.25□□□□□ -1.89
CAPN3P20807 USP9YP6-201ENST00000413550 854 ntBASIC3.25□□□□□ -1.89
CAPN3P20807 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.25□□□□□ -1.89
CAPN3P20807 AC104332.2-201ENST00000429959 156 ntBASIC3.25□□□□□ -1.89
CAPN3P20807 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.25□□□□□ -1.89
CAPN3P20807 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.25□□□□□ -1.89
CAPN3P20807 AC079781.2-201ENST00000446424 169 ntBASIC3.25□□□□□ -1.89
CAPN3P20807 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.25□□□□□ -1.89
CAPN3P20807 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.25□□□□□ -1.89
CAPN3P20807 AC091965.2-201ENST00000512324 613 ntBASIC3.25□□□□□ -1.89
CAPN3P20807 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.25□□□□□ -1.89
CAPN3P20807 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CAPN3P20807 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.25□□□□□ -1.89
CAPN3P20807 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.25□□□□□ -1.89
CAPN3P20807 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.25□□□□□ -1.89
CAPN3P20807 AC024619.4-201ENST00000580924 316 ntBASIC3.25□□□□□ -1.89
CAPN3P20807 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.25□□□□□ -1.89
CAPN3P20807 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.25□□□□□ -1.89
CAPN3P20807 AC130324.3-201ENST00000614165 542 ntBASIC3.25□□□□□ -1.89
CAPN3P20807 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.25□□□□□ -1.89
CAPN3P20807 AC138649.3-201ENST00000622154 254 ntBASIC3.25□□□□□ -1.89
CAPN3P20807 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CAPN3P20807 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.25□□□□□ -1.89
CAPN3P20807 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CAPN3P20807 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CAPN3P20807 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CAPN3P20807 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CAPN3P20807 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CAPN3P20807 AC017071.1-201ENST00000564407 2204 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CAPN3P20807 RNA5SP197-201ENST00000363357 119 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 Y_RNA.201-201ENST00000364052 96 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 RNU1-33P-201ENST00000364249 162 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 RNU6-395P-201ENST00000365662 106 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 AL122016.1-201ENST00000403365 367 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 RPL5P18-201ENST00000406671 891 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 RNU6-387P-201ENST00000411331 105 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.24□□□□□ -1.89
CAPN3P20807 AC009518.2-201ENST00000418056 731 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.24□□□□□ -1.89
CAPN3P20807 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.24□□□□□ -1.89
CAPN3P20807 AC104850.1-201ENST00000435940 476 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 DPPA3P1-201ENST00000448050 469 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 GAPDHP17-201ENST00000449858 1001 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 RNU1-143P-201ENST00000516296 146 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 Y_RNA.688-201ENST00000516565 95 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 Y_RNA.689-201ENST00000516589 107 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 SNORA18.6-201ENST00000516792 115 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 RNU6-410P-201ENST00000517006 107 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 SNORA31.26-201ENST00000517250 137 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.24□□□□□ -1.89
CAPN3P20807 AC103843.2-201ENST00000530523 682 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CAPN3P20807 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CAPN3P20807 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.24□□□□□ -1.89
CAPN3P20807 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.24□□□□□ -1.89
CAPN3P20807 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.24□□□□□ -1.89
CAPN3P20807 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.24□□□□□ -1.89
CAPN3P20807 YPEL5P2-201ENST00000605553 359 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 U1.23-201ENST00000610293 146 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 RNU1-68P-201ENST00000615382 146 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 U1.39-201ENST00000621562 146 ntBASIC3.24□□□□□ -1.89
CAPN3P20807 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CAPN3P20807 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.24□□□□□ -1.89
CAPN3P20807 AC010889.1-201ENST00000566193 2666 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.23□□□□□ -1.89
CAPN3P20807 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CAPN3P20807 RN7SKP226-201ENST00000364912 300 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CAPN3P20807 RNU6-39P-201ENST00000384344 107 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 Y_RNA.510-201ENST00000384511 114 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 Y_RNA.534-201ENST00000384599 112 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 SNORA48.5-201ENST00000391143 135 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CAPN3P20807 AL512633.1-201ENST00000399931 655 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.23□□□□□ -1.89
CAPN3P20807 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.23□□□□□ -1.89
CAPN3P20807 ISCA1P6-201ENST00000427740 390 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.23□□□□□ -1.89
CAPN3P20807 AC009961.2-201ENST00000435771 251 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.23□□□□□ -1.89
CAPN3P20807 AL513043.1-201ENST00000439124 535 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 AC009296.1-201ENST00000443146 155 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 NIPA2P5-201ENST00000452282 464 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 RPS27P29-201ENST00000463110 252 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.23□□□□□ -1.89
CAPN3P20807 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms