Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.03□□□□□ -2.24
TOP2AP11388 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.03□□□□□ -2.24
TOP2AP11388 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.03□□□□□ -2.24
TOP2AP11388 AL353689.1-201ENST00000438895 199 ntBASIC1.03□□□□□ -2.24
TOP2AP11388 RNU6-1073P-201ENST00000517182 106 ntBASIC1.03□□□□□ -2.24
TOP2AP11388 MTND2P13-201ENST00000577438 1039 ntBASIC1.03□□□□□ -2.24
TOP2AP11388 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.03□□□□□ -2.24
TOP2AP11388 AC090970.3-201ENST00000612566 866 ntBASIC1.03□□□□□ -2.24
TOP2AP11388 RBBP8P1-201ENST00000449447 1844 ntBASIC1.03□□□□□ -2.24
TOP2AP11388 MTND4P31-201ENST00000425607 1343 ntBASIC1.02□□□□□ -2.25
TOP2AP11388 RPL23AP32-201ENST00000395315 459 ntBASIC1.02□□□□□ -2.25
TOP2AP11388 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.02□□□□□ -2.25
TOP2AP11388 HSPE1P21-201ENST00000438283 308 ntBASIC1.02□□□□□ -2.25
TOP2AP11388 AC079448.1-201ENST00000449377 373 ntBASIC1.02□□□□□ -2.25
TOP2AP11388 RNU7-157P-201ENST00000459600 66 ntBASIC1.02□□□□□ -2.25
TOP2AP11388 RPL30P5-201ENST00000494923 336 ntBASIC1.02□□□□□ -2.25
TOP2AP11388 AC108078.1-201ENST00000508073 725 ntBASIC1.02□□□□□ -2.25
TOP2AP11388 Y_RNA.681-201ENST00000516445 113 ntBASIC1.02□□□□□ -2.25
TOP2AP11388 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.02□□□□□ -2.25
TOP2AP11388 AL121839.1-201ENST00000556233 1185 ntBASIC1.02□□□□□ -2.25
TOP2AP11388 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC1.02□□□□□ -2.25
TOP2AP11388 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.02□□□□□ -2.25
TOP2AP11388 AC104229.1-201ENST00000561364 255 ntBASIC1.02□□□□□ -2.25
TOP2AP11388 MIR4299-201ENST00000577899 72 ntBASIC1.02□□□□□ -2.25
TOP2AP11388 AC008945.2-201ENST00000606056 604 ntBASIC1.02□□□□□ -2.25
TOP2AP11388 AP003485.1-201ENST00000625093 753 ntBASIC1.02□□□□□ -2.25
TOP2AP11388 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
TOP2AP11388 MIR26B-201ENST00000362251 77 ntBASIC1.01□□□□□ -2.25
TOP2AP11388 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.01□□□□□ -2.25
TOP2AP11388 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
TOP2AP11388 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.01□□□□□ -2.25
TOP2AP11388 MIR2909-201ENST00000617113 69 ntBASIC1.01□□□□□ -2.25
TOP2AP11388 Y_RNA.85-201ENST00000363014 111 ntBASIC1□□□□□ -2.25
TOP2AP11388 AL161651.1-201ENST00000440882 223 ntBASIC1□□□□□ -2.25
TOP2AP11388 OR2A41P-201ENST00000473586 105 ntBASIC1□□□□□ -2.25
TOP2AP11388 NDUFB4P2-201ENST00000509515 391 ntBASIC1□□□□□ -2.25
TOP2AP11388 BNIP3P7-201ENST00000605641 516 ntBASIC1□□□□□ -2.25
TOP2AP11388 AC135507.1-201ENST00000607214 561 ntBASIC1□□□□□ -2.25
TOP2AP11388 AC004808.1-201ENST00000627671 721 ntBASIC1□□□□□ -2.25
TOP2AP11388 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1□□□□□ -2.25
TOP2AP11388 TRGV6-201ENST00000417928 299 ntBASIC0.99□□□□□ -2.25
TOP2AP11388 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.99□□□□□ -2.25
TOP2AP11388 ZNF965P-201ENST00000432501 817 ntBASIC0.99□□□□□ -2.25
TOP2AP11388 AC004383.1-201ENST00000438135 289 ntBASIC0.99□□□□□ -2.25
TOP2AP11388 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.99□□□□□ -2.25
TOP2AP11388 SETP11-201ENST00000473027 690 ntBASIC0.99□□□□□ -2.25
TOP2AP11388 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
TOP2AP11388 OR5AL2P-201ENST00000532185 920 ntBASIC0.99□□□□□ -2.25
TOP2AP11388 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.99□□□□□ -2.25
TOP2AP11388 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.99□□□□□ -2.25
TOP2AP11388 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC0.99□□□□□ -2.25
TOP2AP11388 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.99□□□□□ -2.25
TOP2AP11388 snoU109.1-201ENST00000459339 135 ntBASIC0.99□□□□□ -2.25
TOP2AP11388 AC008834.1-201ENST00000511612 175 ntBASIC0.99□□□□□ -2.25
TOP2AP11388 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.99□□□□□ -2.25
TOP2AP11388 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.99□□□□□ -2.25
TOP2AP11388 LINC00933-203ENST00000559812 219 ntBASIC0.99□□□□□ -2.25
TOP2AP11388 MIR3616-201ENST00000584070 92 ntBASIC0.99□□□□□ -2.25
TOP2AP11388 GAS5-AS1-201ENST00000602767 694 ntBASIC0.99□□□□□ -2.25
TOP2AP11388 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.99□□□□□ -2.25
TOP2AP11388 OR4G3P-201ENST00000633500 913 ntBASIC0.99□□□□□ -2.25
TOP2AP11388 SNORA22-201ENST00000383907 134 ntBASIC0.98□□□□□ -2.25
TOP2AP11388 SNORA22C-201ENST00000384614 134 ntBASIC0.98□□□□□ -2.25
TOP2AP11388 AC016691.1-201ENST00000441321 413 ntBASIC0.98□□□□□ -2.25
TOP2AP11388 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.98□□□□□ -2.25
TOP2AP11388 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.98□□□□□ -2.25
TOP2AP11388 CIR1P1-201ENST00000524055 1133 ntBASIC0.98□□□□□ -2.25
TOP2AP11388 MTCYBP41-201ENST00000528913 1123 ntBASIC0.98□□□□□ -2.25
TOP2AP11388 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
TOP2AP11388 AC098934.3-201ENST00000430450 190 ntBASIC0.97□□□□□ -2.25
TOP2AP11388 RPL31P60-201ENST00000478450 367 ntBASIC0.97□□□□□ -2.25
TOP2AP11388 RPS27P23-201ENST00000487608 251 ntBASIC0.97□□□□□ -2.25
TOP2AP11388 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TOP2AP11388 RNA5SP476-201ENST00000516613 103 ntBASIC0.97□□□□□ -2.25
TOP2AP11388 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.97□□□□□ -2.25
TOP2AP11388 AL450336.1-201ENST00000605180 586 ntBASIC0.97□□□□□ -2.25
TOP2AP11388 AC007038.2-201ENST00000608095 740 ntBASIC0.97□□□□□ -2.25
TOP2AP11388 MIR6076-201ENST00000617521 113 ntBASIC0.97□□□□□ -2.25
TOP2AP11388 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.97□□□□□ -2.25
TOP2AP11388 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TOP2AP11388 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
TOP2AP11388 SNORA70.7-201ENST00000384159 133 ntBASIC0.96□□□□□ -2.26
TOP2AP11388 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.96□□□□□ -2.26
TOP2AP11388 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.96□□□□□ -2.26
TOP2AP11388 RNA5SP121-201ENST00000516537 101 ntBASIC0.96□□□□□ -2.26
TOP2AP11388 RNU6-229P-201ENST00000516614 102 ntBASIC0.96□□□□□ -2.26
TOP2AP11388 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC0.96□□□□□ -2.26
TOP2AP11388 OR1M4P-201ENST00000589199 287 ntBASIC0.96□□□□□ -2.26
TOP2AP11388 HSPE1P19-201ENST00000603327 295 ntBASIC0.96□□□□□ -2.26
TOP2AP11388 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.96□□□□□ -2.26
TOP2AP11388 AC008669.1-201ENST00000565823 2178 ntBASIC0.96□□□□□ -2.26
TOP2AP11388 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
TOP2AP11388 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
TOP2AP11388 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.95□□□□□ -2.26
TOP2AP11388 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.95□□□□□ -2.26
TOP2AP11388 SNORA31.25-201ENST00000517242 134 ntBASIC0.95□□□□□ -2.26
TOP2AP11388 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.95□□□□□ -2.26
TOP2AP11388 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.95□□□□□ -2.26
TOP2AP11388 AC067838.1-201ENST00000606064 577 ntBASIC0.95□□□□□ -2.26
TOP2AP11388 AL031775.1-201ENST00000607014 887 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms