Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AL512310.1-201ENST00000548639 172 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 AC125611.2-201ENST00000551907 647 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXC4P09017 MIR3609-201ENST00000582661 80 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXC4P09017 AC080078.2-201ENST00000603766 501 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 TUG1_1.1-201ENST00000610654 145 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HOXC4P09017 SNHG22-203ENST00000617833 660 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 AC005858.4-201ENST00000623191 700 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 AC025034.2-201ENST00000623264 286 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.49□□□□□ -2.01
HOXC4P09017 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HOXC4P09017 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HOXC4P09017 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HOXC4P09017 AC016717.2-201ENST00000609089 5141 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HOXC4P09017 RNU6-501P-201ENST00000364072 100 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 RNU6-289P-201ENST00000364093 107 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXC4P09017 AL359511.1-201ENST00000402970 211 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC080125.1-201ENST00000414888 684 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC009963.1-201ENST00000417265 157 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.48□□□□□ -2.01
HOXC4P09017 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.48□□□□□ -2.01
HOXC4P09017 LSM1P1-201ENST00000438629 273 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXC4P09017 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXC4P09017 MRPL50P4-201ENST00000446432 475 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXC4P09017 RNU7-136P-201ENST00000458819 69 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC026410.2-201ENST00000460281 156 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXC4P09017 SNORA31.15-201ENST00000516771 132 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXC4P09017 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXC4P09017 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXC4P09017 AP003122.3-201ENST00000526316 255 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.48□□□□□ -2.01
HOXC4P09017 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.48□□□□□ -2.01
HOXC4P09017 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXC4P09017 PCMTD1P2-201ENST00000565017 355 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXC4P09017 AC079089.3-201ENST00000603094 673 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC073648.5-201ENST00000603502 305 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AL049779.4-201ENST00000604500 156 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC007621.1-201ENST00000604544 437 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC068276.1-201ENST00000605793 379 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC087752.4-201ENST00000605911 462 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC090186.1-201ENST00000605991 572 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC080013.4-201ENST00000607624 649 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC012360.2-201ENST00000609349 391 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC027807.2-201ENST00000616099 408 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC004009.2-201ENST00000623016 728 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC027309.3-201ENST00000623419 351 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 AC025048.6-202ENST00000627667 438 ntBASIC2.48□□□□□ -2.01
HOXC4P09017 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HOXC4P09017 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HOXC4P09017 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.48□□□□□ -2.01
HOXC4P09017 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.47□□□□□ -2.01
HOXC4P09017 MTND5P29-201ENST00000458676 1807 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
HOXC4P09017 AC099654.7-201ENST00000635788 2127 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 TPTE2P4-201ENST00000258589 1605 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.47□□□□□ -2.01
HOXC4P09017 AC097714.1-201ENST00000511272 1647 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HOXC4P09017 Y_RNA.3-201ENST00000362331 103 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 RNU6-462P-201ENST00000362659 105 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 RNU6-343P-201ENST00000364709 104 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.47□□□□□ -2.01
HOXC4P09017 RNU1-138P-201ENST00000384093 164 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 SNORA36C-201ENST00000384289 132 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 RNU6-348P-201ENST00000384386 107 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 Y_RNA.517-201ENST00000384551 106 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 MIR135A2-201ENST00000384854 100 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 MIR592-201ENST00000384959 97 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 RNU6-952P-201ENST00000391164 108 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 RNU6-1197P-201ENST00000391183 107 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 FO393413.1-201ENST00000402892 195 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 AF274854.1-201ENST00000413236 615 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 HMGB1P11-201ENST00000413899 637 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 AL445669.1-201ENST00000426743 755 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 SUMO1P4-201ENST00000429430 302 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXC4P09017 GDI2P2-201ENST00000445131 608 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 BMI1P1-201ENST00000445879 941 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 AL592447.1-201ENST00000447592 540 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 EEF1B2P7-201ENST00000451177 676 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.47□□□□□ -2.01
HOXC4P09017 AL049714.1-201ENST00000466686 347 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 AP000852.1-201ENST00000472460 573 ntBASIC2.47□□□□□ -2.01
HOXC4P09017 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.47□□□□□ -2.01
HOXC4P09017 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXC4P09017 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.47□□□□□ -2.01
HOXC4P09017 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms