Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.76□□□□□ -2.29
SPTA1P02549 AL161722.3-201ENST00000605789 2983 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 AC015726.3-201ENST00000624501 418 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 AC097655.1-201ENST00000635075 318 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 AC091812.1-201ENST00000432235 1948 ntBASIC0.76□□□□□ -2.29
SPTA1P02549 MIR409-201ENST00000362237 79 ntBASIC0.75□□□□□ -2.29
SPTA1P02549 AL139397.2-201ENST00000404529 772 ntBASIC0.75□□□□□ -2.29
SPTA1P02549 AC015922.2-201ENST00000435593 184 ntBASIC0.75□□□□□ -2.29
SPTA1P02549 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
SPTA1P02549 MTND2P8-201ENST00000450555 1025 ntBASIC0.75□□□□□ -2.29
SPTA1P02549 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.75□□□□□ -2.29
SPTA1P02549 AL133507.1-201ENST00000605269 557 ntBASIC0.75□□□□□ -2.29
SPTA1P02549 AC009090.3-201ENST00000616553 565 ntBASIC0.75□□□□□ -2.29
SPTA1P02549 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.75□□□□□ -2.29
SPTA1P02549 AC007275.1-201ENST00000621243 671 ntBASIC0.75□□□□□ -2.29
SPTA1P02549 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.75□□□□□ -2.29
SPTA1P02549 RNU6-16P-201ENST00000384385 107 ntBASIC0.75□□□□□ -2.29
SPTA1P02549 MIR150-201ENST00000385048 84 ntBASIC0.75□□□□□ -2.29
SPTA1P02549 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.75□□□□□ -2.29
SPTA1P02549 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.75□□□□□ -2.29
SPTA1P02549 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.75□□□□□ -2.29
SPTA1P02549 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.75□□□□□ -2.29
SPTA1P02549 RNU7-26P-201ENST00000458980 63 ntBASIC0.75□□□□□ -2.29
SPTA1P02549 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.75□□□□□ -2.29
SPTA1P02549 AP005902.1-201ENST00000521358 186 ntBASIC0.75□□□□□ -2.29
SPTA1P02549 AL590282.1-201ENST00000610379 1136 ntBASIC0.75□□□□□ -2.29
SPTA1P02549 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.75□□□□□ -2.29
SPTA1P02549 AC024595.1-201ENST00000623088 387 ntBASIC0.75□□□□□ -2.29
SPTA1P02549 Y_RNA.142-201ENST00000363491 102 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 RNU6-173P-201ENST00000364215 104 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 SNORA81-201ENST00000408493 178 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 SNRPEP4-201ENST00000435815 279 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 RPL31P20-201ENST00000449593 360 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 C1DP3-201ENST00000455013 423 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 AC020699.1-201ENST00000505161 445 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.74□□□□□ -2.29
SPTA1P02549 AP004247.1-201ENST00000531556 1289 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.74□□□□□ -2.29
SPTA1P02549 AC087465.1-201ENST00000560574 245 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 MIR548Y-201ENST00000582739 110 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 AP000654.2-201ENST00000605633 586 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.74□□□□□ -2.29
SPTA1P02549 RNU6-942P-201ENST00000363002 107 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 SNORD114-2-201ENST00000363953 78 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 RNU4-42P-201ENST00000364738 142 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 Y_RNA.324-201ENST00000365165 102 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 CIR1P3-201ENST00000405137 479 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
SPTA1P02549 OSTCP8-201ENST00000445117 448 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 AL031183.1-201ENST00000457667 207 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.74□□□□□ -2.29
SPTA1P02549 AC004062.1-201ENST00000509926 645 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 MRPS17P9-201ENST00000511924 393 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 NDUFS5P6-201ENST00000529136 295 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 CYCSP26-201ENST00000534107 320 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.74□□□□□ -2.29
SPTA1P02549 PCNAP1-202ENST00000595299 752 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.74□□□□□ -2.29
SPTA1P02549 AL391834.1-201ENST00000609609 560 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 AL162373.1-201ENST00000620433 407 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 AC091932.3-201ENST00000624223 323 ntBASIC0.74□□□□□ -2.29
SPTA1P02549 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.73□□□□□ -2.29
SPTA1P02549 snoU13.7-201ENST00000459220 104 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 AP002371.1-201ENST00000463604 433 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 HMGN1P10-201ENST00000474557 553 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 NCOR1P1-202ENST00000486162 291 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SPTA1P02549 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.73□□□□□ -2.29
SPTA1P02549 AC025768.1-201ENST00000510057 267 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.73□□□□□ -2.29
SPTA1P02549 MIR3117-201ENST00000584034 78 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 AL136363.1-201ENST00000605349 337 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 AP001486.3-201ENST00000615334 372 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
SPTA1P02549 AC100821.1-201ENST00000523153 2479 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 RNU6-629P-201ENST00000384061 103 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 SNORA1.3-201ENST00000384676 136 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 MIR607-201ENST00000385241 96 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 SFR1P1-201ENST00000403720 688 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 MIR1912-201ENST00000410389 80 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 RNU6-193P-201ENST00000410977 107 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.73□□□□□ -2.29
SPTA1P02549 ARL2BPP3-201ENST00000421226 480 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 AC005410.1-202ENST00000460347 485 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 NAP1L1P3-201ENST00000462291 880 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC0.73□□□□□ -2.29
SPTA1P02549 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
SPTA1P02549 MIR4636-201ENST00000582271 80 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.73□□□□□ -2.29
SPTA1P02549 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.73□□□□□ -2.29
SPTA1P02549 AC013244.2-201ENST00000603396 103 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 OR5H6-203ENST00000642105 978 ntBASIC0.73□□□□□ -2.29
SPTA1P02549 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 RNU6-335P-201ENST00000364563 113 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 AL133384.1-201ENST00000412744 351 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 AC087588.1-201ENST00000462203 316 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
SPTA1P02549 AL135752.1-201ENST00000479477 471 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 RPL21P103-201ENST00000479921 488 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms