Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.91□□□□□ -1.94
SIX3O95343 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.91□□□□□ -1.94
SIX3O95343 BNIP3P8-201ENST00000597863 560 ntBASIC2.91□□□□□ -1.94
SIX3O95343 AC010620.2-201ENST00000600135 313 ntBASIC2.91□□□□□ -1.94
SIX3O95343 AC013562.2-201ENST00000611632 603 ntBASIC2.91□□□□□ -1.94
SIX3O95343 MIR3199-2-201ENST00000636243 86 ntBASIC2.91□□□□□ -1.94
SIX3O95343 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.91□□□□□ -1.94
SIX3O95343 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SIX3O95343 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SIX3O95343 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SIX3O95343 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.9□□□□□ -1.94
SIX3O95343 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SIX3O95343 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
SIX3O95343 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.9□□□□□ -1.95
SIX3O95343 RNU6-658P-201ENST00000384606 106 ntBASIC2.9□□□□□ -1.95
SIX3O95343 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SIX3O95343 AL049545.1-201ENST00000401856 572 ntBASIC2.9□□□□□ -1.95
SIX3O95343 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.9□□□□□ -1.95
SIX3O95343 NDUFS5P4-201ENST00000412983 318 ntBASIC2.9□□□□□ -1.95
SIX3O95343 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
SIX3O95343 RPL7P37-201ENST00000425095 738 ntBASIC2.9□□□□□ -1.95
SIX3O95343 AC093106.2-201ENST00000428212 385 ntBASIC2.9□□□□□ -1.95
SIX3O95343 AL671855.1-201ENST00000446875 1203 ntBASIC2.9□□□□□ -1.95
SIX3O95343 MTND1P12-201ENST00000455231 147 ntBASIC2.9□□□□□ -1.95
SIX3O95343 RPL31P41-201ENST00000477967 372 ntBASIC2.9□□□□□ -1.95
SIX3O95343 MTND1P3-201ENST00000484956 952 ntBASIC2.9□□□□□ -1.95
SIX3O95343 RNU6-1092P-201ENST00000516955 87 ntBASIC2.9□□□□□ -1.95
SIX3O95343 AC026407.1-201ENST00000518369 204 ntBASIC2.9□□□□□ -1.95
SIX3O95343 AP003181.2-201ENST00000528941 181 ntBASIC2.9□□□□□ -1.95
SIX3O95343 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.9□□□□□ -1.95
SIX3O95343 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.9□□□□□ -1.95
SIX3O95343 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.9□□□□□ -1.95
SIX3O95343 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.9□□□□□ -1.95
SIX3O95343 AL355598.1-201ENST00000604169 202 ntBASIC2.9□□□□□ -1.95
SIX3O95343 AC007363.1-201ENST00000604736 620 ntBASIC2.9□□□□□ -1.95
SIX3O95343 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.9□□□□□ -1.95
SIX3O95343 AC093908.1-201ENST00000623125 8092 ntBASIC2.9□□□□□ -1.95
SIX3O95343 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SIX3O95343 ADAM3A-203ENST00000461344 2157 ntBASIC2.9□□□□□ -1.95
SIX3O95343 MTND4P4-201ENST00000439033 1366 ntBASIC2.89□□□□□ -1.95
SIX3O95343 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SIX3O95343 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.89□□□□□ -1.95
SIX3O95343 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
SIX3O95343 SNORA51.4-201ENST00000364993 124 ntBASIC2.89□□□□□ -1.95
SIX3O95343 DYNLT3P1-201ENST00000378574 347 ntBASIC2.89□□□□□ -1.95
SIX3O95343 MT-TH-201ENST00000387441 69 ntBASIC2.89□□□□□ -1.95
SIX3O95343 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SIX3O95343 RNU6-817P-201ENST00000391083 104 ntBASIC2.89□□□□□ -1.95
SIX3O95343 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.89□□□□□ -1.95
SIX3O95343 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.89□□□□□ -1.95
SIX3O95343 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.89□□□□□ -1.95
SIX3O95343 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.89□□□□□ -1.95
SIX3O95343 AC104332.2-201ENST00000429959 156 ntBASIC2.89□□□□□ -1.95
SIX3O95343 CETN4P-201ENST00000432407 469 ntBASIC2.89□□□□□ -1.95
SIX3O95343 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.89□□□□□ -1.95
SIX3O95343 RPS15AP34-201ENST00000487776 387 ntBASIC2.89□□□□□ -1.95
SIX3O95343 AC006445.1-201ENST00000491925 405 ntBASIC2.89□□□□□ -1.95
SIX3O95343 SEM1P1-201ENST00000506694 209 ntBASIC2.89□□□□□ -1.95
SIX3O95343 AC008885.1-201ENST00000514930 301 ntBASIC2.89□□□□□ -1.95
SIX3O95343 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.89□□□□□ -1.95
SIX3O95343 RPS3AP4-201ENST00000555161 764 ntBASIC2.89□□□□□ -1.95
SIX3O95343 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.89□□□□□ -1.95
SIX3O95343 DUSP12P1-201ENST00000612874 516 ntBASIC2.89□□□□□ -1.95
SIX3O95343 AC008250.2-201ENST00000615261 205 ntBASIC2.89□□□□□ -1.95
SIX3O95343 AC104010.1-201ENST00000616889 150 ntBASIC2.89□□□□□ -1.95
SIX3O95343 AC078883.4-201ENST00000623218 367 ntBASIC2.89□□□□□ -1.95
SIX3O95343 AL512643.1-201ENST00000635735 524 ntBASIC2.89□□□□□ -1.95
SIX3O95343 U6.99-201ENST00000637524 83 ntBASIC2.89□□□□□ -1.95
SIX3O95343 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
SIX3O95343 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SIX3O95343 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.89□□□□□ -1.95
SIX3O95343 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SIX3O95343 ZNF519P1-201ENST00000449011 1626 ntBASIC2.89□□□□□ -1.95
SIX3O95343 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SIX3O95343 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.89□□□□□ -1.95
SIX3O95343 AC138915.1-201ENST00000565427 1685 ntBASIC2.88□□□□□ -1.95
SIX3O95343 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
SIX3O95343 RNA5SP374-201ENST00000362939 125 ntBASIC2.88□□□□□ -1.95
SIX3O95343 SNORD56.2-201ENST00000363242 71 ntBASIC2.88□□□□□ -1.95
SIX3O95343 RNU1-73P-201ENST00000383971 164 ntBASIC2.88□□□□□ -1.95
SIX3O95343 AF228730.1-201ENST00000397972 663 ntBASIC2.88□□□□□ -1.95
SIX3O95343 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
SIX3O95343 RPL26P27-201ENST00000414397 437 ntBASIC2.88□□□□□ -1.95
SIX3O95343 AL353729.1-201ENST00000425044 720 ntBASIC2.88□□□□□ -1.95
SIX3O95343 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.88□□□□□ -1.95
SIX3O95343 AC092447.3-201ENST00000426027 686 ntBASIC2.88□□□□□ -1.95
SIX3O95343 AL589872.1-201ENST00000426602 288 ntBASIC2.88□□□□□ -1.95
SIX3O95343 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.88□□□□□ -1.95
SIX3O95343 ISCA1P6-201ENST00000427740 390 ntBASIC2.88□□□□□ -1.95
SIX3O95343 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.88□□□□□ -1.95
SIX3O95343 HMGB1P9-201ENST00000429856 646 ntBASIC2.88□□□□□ -1.95
SIX3O95343 AL592045.1-201ENST00000429867 352 ntBASIC2.88□□□□□ -1.95
SIX3O95343 OR2B8P-201ENST00000432841 938 ntBASIC2.88□□□□□ -1.95
SIX3O95343 AL591212.2-201ENST00000433923 257 ntBASIC2.88□□□□□ -1.95
SIX3O95343 SETP8-201ENST00000435341 628 ntBASIC2.88□□□□□ -1.95
SIX3O95343 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.88□□□□□ -1.95
SIX3O95343 AC025750.2-201ENST00000442609 450 ntBASIC2.88□□□□□ -1.95
SIX3O95343 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.88□□□□□ -1.95
SIX3O95343 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.88□□□□□ -1.95
SIX3O95343 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms