Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 Y_RNA.373-201ENST00000365600 103 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 U1.1-201ENST00000384101 164 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 RNU6-434P-201ENST00000384376 107 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 RNU1-13P-201ENST00000384499 162 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 RNU6-140P-201ENST00000384566 108 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 SNORA16.2-201ENST00000390991 127 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 RPL21P90-201ENST00000415692 466 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.72□□□□□ -1.81
PHGDHO43175 AL669831.1-202ENST00000428504 417 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.72□□□□□ -1.81
PHGDHO43175 GTF2IP13-201ENST00000438487 386 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 HMGB3P11-201ENST00000440127 604 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PHGDHO43175 HSFY6P-201ENST00000445573 403 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 MTND5P20-201ENST00000448677 143 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.72□□□□□ -1.81
PHGDHO43175 RNU6-1208P-201ENST00000459588 107 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 AC007547.1-201ENST00000462177 490 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 Y_RNA.654-201ENST00000497848 106 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 AC009901.1-201ENST00000506703 541 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.72□□□□□ -1.81
PHGDHO43175 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.72□□□□□ -1.81
PHGDHO43175 AC104136.1-201ENST00000512969 394 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 Y_RNA.702-201ENST00000516843 96 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.72□□□□□ -1.81
PHGDHO43175 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.72□□□□□ -1.81
PHGDHO43175 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.72□□□□□ -1.81
PHGDHO43175 AP003122.3-201ENST00000526316 255 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 AC084851.1-201ENST00000529105 249 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PHGDHO43175 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.72□□□□□ -1.81
PHGDHO43175 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.72□□□□□ -1.81
PHGDHO43175 AC092747.3-201ENST00000603769 301 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 AC004805.2-201ENST00000605382 482 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 U2.17-201ENST00000611454 95 ntBASIC3.72□□□□□ -1.81
PHGDHO43175 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
PHGDHO43175 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.72□□□□□ -1.81
PHGDHO43175 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PHGDHO43175 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.71□□□□□ -1.81
PHGDHO43175 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PHGDHO43175 SPRR2C-201ENST00000290702 219 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 RNU6-82P-201ENST00000363970 107 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 RNU6-522P-201ENST00000364497 107 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 Y_RNA.279-201ENST00000364763 95 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 MIR578-201ENST00000384828 96 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 RPS4XP3-201ENST00000398541 413 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 AL391417.1-201ENST00000404100 426 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 RPS4XP7-201ENST00000406274 780 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 AP000567.1-201ENST00000406413 156 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 AL158156.1-201ENST00000422509 473 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 AC012498.1-201ENST00000424037 437 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 RSL24D1P6-201ENST00000426934 401 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 AL117339.2-201ENST00000430475 180 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 AC091390.1-201ENST00000433904 331 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 OR4C10P-201ENST00000434991 931 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 HMGN2P7-201ENST00000456186 273 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 PMCHL2-203ENST00000457791 237 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 AC084357.1-201ENST00000473404 255 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 AC068587.1-201ENST00000483613 781 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 AC008628.2-201ENST00000502605 298 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 Y_RNA.665-201ENST00000516177 98 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 SCARNA14-201ENST00000516903 136 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 RPL7P20-201ENST00000520308 745 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PHGDHO43175 AC008011.1-201ENST00000545989 227 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.71□□□□□ -1.82
PHGDHO43175 AL606490.9-201ENST00000603331 271 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.71□□□□□ -1.82
PHGDHO43175 AC093913.1-201ENST00000614178 329 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 AC002076.2-201ENST00000617362 122 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 AL136221.1-201ENST00000621449 509 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.71□□□□□ -1.82
PHGDHO43175 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.71□□□□□ -1.82
PHGDHO43175 AP004289.2-201ENST00000444413 1457 ntBASIC3.71□□□□□ -1.82
PHGDHO43175 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.71□□□□□ -1.82
PHGDHO43175 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PHGDHO43175 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PHGDHO43175 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.71□□□□□ -1.82
PHGDHO43175 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PHGDHO43175 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PHGDHO43175 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.7□□□□□ -1.82
PHGDHO43175 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.7□□□□□ -1.82
PHGDHO43175 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.7□□□□□ -1.82
PHGDHO43175 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PHGDHO43175 Y_RNA.33-201ENST00000362591 102 ntBASIC3.7□□□□□ -1.82
PHGDHO43175 RNU6-371P-201ENST00000364283 108 ntBASIC3.7□□□□□ -1.82
PHGDHO43175 RNU6-395P-201ENST00000365662 106 ntBASIC3.7□□□□□ -1.82
PHGDHO43175 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.7□□□□□ -1.82
PHGDHO43175 SNORA32.2-201ENST00000384049 122 ntBASIC3.7□□□□□ -1.82
PHGDHO43175 RNU6-213P-201ENST00000384051 104 ntBASIC3.7□□□□□ -1.82
PHGDHO43175 RNU6-45P-201ENST00000384471 107 ntBASIC3.7□□□□□ -1.82
PHGDHO43175 RNA5SP219-201ENST00000390940 113 ntBASIC3.7□□□□□ -1.82
PHGDHO43175 RPL32P23-201ENST00000397237 405 ntBASIC3.7□□□□□ -1.82
PHGDHO43175 RNU6-1025P-201ENST00000410629 104 ntBASIC3.7□□□□□ -1.82
PHGDHO43175 RNU2-68P-201ENST00000410878 191 ntBASIC3.7□□□□□ -1.82
PHGDHO43175 POLHP1-201ENST00000411806 470 ntBASIC3.7□□□□□ -1.82
PHGDHO43175 BX682237.1-201ENST00000415016 335 ntBASIC3.7□□□□□ -1.82
PHGDHO43175 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.7□□□□□ -1.82
PHGDHO43175 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms