Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
LSM1O15116 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LSM1O15116 OR5H15-201ENST00000383696 930 ntBASIC2.22□□□□□ -2.05
LSM1O15116 MIR19A-201ENST00000384878 82 ntBASIC2.22□□□□□ -2.05
LSM1O15116 AL445529.1-201ENST00000398713 389 ntBASIC2.22□□□□□ -2.05
LSM1O15116 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.22□□□□□ -2.05
LSM1O15116 RN7SKP266-201ENST00000410232 287 ntBASIC2.22□□□□□ -2.05
LSM1O15116 RPL17P12-201ENST00000413391 526 ntBASIC2.22□□□□□ -2.05
LSM1O15116 AC236972.1-201ENST00000433225 199 ntBASIC2.22□□□□□ -2.05
LSM1O15116 ATP5F1P1-201ENST00000433775 569 ntBASIC2.22□□□□□ -2.05
LSM1O15116 RPS15AP28-201ENST00000435088 386 ntBASIC2.22□□□□□ -2.05
LSM1O15116 RPS25P9-201ENST00000435591 252 ntBASIC2.22□□□□□ -2.05
LSM1O15116 PSPHP1-201ENST00000450062 261 ntBASIC2.22□□□□□ -2.05
LSM1O15116 KLF3P2-201ENST00000465138 268 ntBASIC2.22□□□□□ -2.05
LSM1O15116 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.22□□□□□ -2.05
LSM1O15116 AC004924.1-201ENST00000480160 781 ntBASIC2.22□□□□□ -2.05
LSM1O15116 AC234781.5-201ENST00000508429 271 ntBASIC2.22□□□□□ -2.05
LSM1O15116 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.22□□□□□ -2.05
LSM1O15116 RNU4-29P-201ENST00000515943 174 ntBASIC2.22□□□□□ -2.05
LSM1O15116 RNU1-103P-201ENST00000516502 125 ntBASIC2.22□□□□□ -2.05
LSM1O15116 SCARNA3-201ENST00000517097 143 ntBASIC2.22□□□□□ -2.05
LSM1O15116 RNA5SP165-201ENST00000517142 115 ntBASIC2.22□□□□□ -2.05
LSM1O15116 AC021269.2-201ENST00000532318 330 ntBASIC2.22□□□□□ -2.05
LSM1O15116 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.22□□□□□ -2.05
LSM1O15116 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.22□□□□□ -2.05
LSM1O15116 AC021739.1-201ENST00000559631 174 ntBASIC2.22□□□□□ -2.05
LSM1O15116 AC009712.1-201ENST00000564938 316 ntBASIC2.22□□□□□ -2.05
LSM1O15116 AC106782.4-201ENST00000568264 210 ntBASIC2.22□□□□□ -2.05
LSM1O15116 AC024619.4-201ENST00000580924 316 ntBASIC2.22□□□□□ -2.05
LSM1O15116 MIR5007-201ENST00000583098 95 ntBASIC2.22□□□□□ -2.05
LSM1O15116 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.22□□□□□ -2.05
LSM1O15116 AC005261.5-201ENST00000596280 355 ntBASIC2.22□□□□□ -2.05
LSM1O15116 BNIP3P27-201ENST00000599991 412 ntBASIC2.22□□□□□ -2.05
LSM1O15116 AC098826.3-201ENST00000603823 466 ntBASIC2.22□□□□□ -2.05
LSM1O15116 DUSP12P1-201ENST00000612874 516 ntBASIC2.22□□□□□ -2.05
LSM1O15116 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.22□□□□□ -2.05
LSM1O15116 AC010678.1-201ENST00000614118 713 ntBASIC2.22□□□□□ -2.05
LSM1O15116 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.22□□□□□ -2.05
LSM1O15116 AC012150.2-201ENST00000621300 544 ntBASIC2.22□□□□□ -2.05
LSM1O15116 MIR6766-201ENST00000622641 72 ntBASIC2.22□□□□□ -2.05
LSM1O15116 AC007998.5-201ENST00000622938 237 ntBASIC2.22□□□□□ -2.05
LSM1O15116 AP003485.2-201ENST00000623636 610 ntBASIC2.22□□□□□ -2.05
LSM1O15116 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.22□□□□□ -2.05
LSM1O15116 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
LSM1O15116 HSPE1P11-201ENST00000339579 310 ntBASIC2.21□□□□□ -2.06
LSM1O15116 SNORA5B-201ENST00000363786 132 ntBASIC2.21□□□□□ -2.06
LSM1O15116 RNU6-853P-201ENST00000364306 107 ntBASIC2.21□□□□□ -2.06
LSM1O15116 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LSM1O15116 AL359634.1-202ENST00000404721 284 ntBASIC2.21□□□□□ -2.06
LSM1O15116 NDUFB4P4-201ENST00000404822 243 ntBASIC2.21□□□□□ -2.06
LSM1O15116 SNORD23.1-201ENST00000408212 104 ntBASIC2.21□□□□□ -2.06
LSM1O15116 USP9YP33-201ENST00000412220 421 ntBASIC2.21□□□□□ -2.06
LSM1O15116 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.21□□□□□ -2.06
LSM1O15116 RPL21P24-201ENST00000413752 448 ntBASIC2.21□□□□□ -2.06
LSM1O15116 AC003685.2-201ENST00000422795 395 ntBASIC2.21□□□□□ -2.06
LSM1O15116 TXNL1P1-201ENST00000429528 554 ntBASIC2.21□□□□□ -2.06
LSM1O15116 MYL8P-204ENST00000431574 518 ntBASIC2.21□□□□□ -2.06
LSM1O15116 USP9YP35-201ENST00000435696 412 ntBASIC2.21□□□□□ -2.06
LSM1O15116 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.21□□□□□ -2.06
LSM1O15116 AC018634.1-201ENST00000437554 401 ntBASIC2.21□□□□□ -2.06
LSM1O15116 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LSM1O15116 AC005094.1-201ENST00000440420 368 ntBASIC2.21□□□□□ -2.06
LSM1O15116 AL831737.1-201ENST00000441288 271 ntBASIC2.21□□□□□ -2.06
LSM1O15116 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.21□□□□□ -2.06
LSM1O15116 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.21□□□□□ -2.06
LSM1O15116 AC034222.1-201ENST00000494052 532 ntBASIC2.21□□□□□ -2.06
LSM1O15116 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.21□□□□□ -2.06
LSM1O15116 RPL7P20-201ENST00000520308 745 ntBASIC2.21□□□□□ -2.06
LSM1O15116 AP005902.1-201ENST00000521358 186 ntBASIC2.21□□□□□ -2.06
LSM1O15116 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.21□□□□□ -2.06
LSM1O15116 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.21□□□□□ -2.06
LSM1O15116 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.21□□□□□ -2.06
LSM1O15116 MIR3199-1-201ENST00000582434 88 ntBASIC2.21□□□□□ -2.06
LSM1O15116 AP001269.3-201ENST00000588718 329 ntBASIC2.21□□□□□ -2.06
LSM1O15116 AL596327.1-201ENST00000603629 213 ntBASIC2.21□□□□□ -2.06
LSM1O15116 MTND3P19-201ENST00000603825 345 ntBASIC2.21□□□□□ -2.06
LSM1O15116 AC006023.1-201ENST00000603944 259 ntBASIC2.21□□□□□ -2.06
LSM1O15116 AC091152.3-201ENST00000604227 325 ntBASIC2.21□□□□□ -2.06
LSM1O15116 AL021997.1-201ENST00000605757 193 ntBASIC2.21□□□□□ -2.06
LSM1O15116 AC046143.2-201ENST00000609789 160 ntBASIC2.21□□□□□ -2.06
LSM1O15116 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LSM1O15116 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
LSM1O15116 AC024581.2-201ENST00000619986 252 ntBASIC2.21□□□□□ -2.06
LSM1O15116 AL138960.2-201ENST00000625145 535 ntBASIC2.21□□□□□ -2.06
LSM1O15116 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.21□□□□□ -2.06
LSM1O15116 HSPA8P4-201ENST00000511877 1920 ntBASIC2.21□□□□□ -2.06
LSM1O15116 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.2□□□□□ -2.06
LSM1O15116 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LSM1O15116 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LSM1O15116 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.2□□□□□ -2.06
LSM1O15116 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LSM1O15116 AL591416.1-201ENST00000404015 867 ntBASIC2.2□□□□□ -2.06
LSM1O15116 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.2□□□□□ -2.06
LSM1O15116 CYCSP48-201ENST00000417124 323 ntBASIC2.2□□□□□ -2.06
LSM1O15116 RPS3AP37-201ENST00000419176 745 ntBASIC2.2□□□□□ -2.06
LSM1O15116 NANOGP5-201ENST00000424456 877 ntBASIC2.2□□□□□ -2.06
LSM1O15116 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.2□□□□□ -2.06
LSM1O15116 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.2□□□□□ -2.06
LSM1O15116 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.2□□□□□ -2.06
LSM1O15116 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms