Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXN3O00409 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXN3O00409 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXN3O00409 AL445584.1-201ENST00000431451 330 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXN3O00409 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXN3O00409 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXN3O00409 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXN3O00409 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXN3O00409 ELOCP23-201ENST00000452014 332 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 AL356010.1-201ENST00000456364 102 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 AC083798.1-201ENST00000472671 131 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 RPL36AP51-201ENST00000487216 318 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXN3O00409 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXN3O00409 RNU2-27P-201ENST00000516185 142 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 RNU6-143P-201ENST00000516942 93 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXN3O00409 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXN3O00409 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXN3O00409 OR5BN1P-201ENST00000532955 829 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXN3O00409 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXN3O00409 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.8□□□□□ -1.8
FOXN3O00409 AC008521.1-201ENST00000587471 187 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXN3O00409 AL162413.1-201ENST00000603198 110 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 BNIP3P9-201ENST00000603714 553 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 AC002553.4-201ENST00000616896 331 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 U7.8-201ENST00000619968 63 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 AC022149.2-201ENST00000621061 203 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXN3O00409 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXN3O00409 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
FOXN3O00409 ZNF807-201ENST00000328088 1707 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
FOXN3O00409 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXN3O00409 CKAP2P1-201ENST00000555477 2049 ntBASIC3.8□□□□□ -1.8
FOXN3O00409 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXN3O00409 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXN3O00409 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXN3O00409 AC006020.1-201ENST00000420179 1854 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 MT-TL1-201ENST00000386347 75 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 ATP5A1P2-201ENST00000412323 255 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.79□□□□□ -1.8
FOXN3O00409 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.79□□□□□ -1.8
FOXN3O00409 AL158071.1-201ENST00000430315 461 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.79□□□□□ -1.8
FOXN3O00409 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.79□□□□□ -1.8
FOXN3O00409 RPS3AP46-201ENST00000448352 682 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.79□□□□□ -1.8
FOXN3O00409 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.79□□□□□ -1.8
FOXN3O00409 AL163973.1-201ENST00000484753 577 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 RPL30P5-201ENST00000494923 336 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.79□□□□□ -1.8
FOXN3O00409 PCBP2P3-201ENST00000509726 843 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 AC010265.1-201ENST00000513509 211 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 SNORA40.12-201ENST00000516329 111 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 ATP5F1P5-201ENST00000526403 760 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.79□□□□□ -1.8
FOXN3O00409 TRAV28-201ENST00000557548 323 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 AC106785.1-201ENST00000565935 262 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 MIR4703-201ENST00000577728 79 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 AC091135.1-201ENST00000585943 307 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 AL161798.1-201ENST00000604630 131 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 AL353621.2-201ENST00000605340 133 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.79□□□□□ -1.8
FOXN3O00409 AC009570.1-201ENST00000609599 745 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 AL020991.1-201ENST00000612314 373 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 AC002076.2-201ENST00000617362 122 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
FOXN3O00409 U4.6-201ENST00000621618 127 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 YWHAEP7-203ENST00000622054 312 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 AL357559.1-201ENST00000622228 274 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 AC027309.3-201ENST00000623419 351 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.79□□□□□ -1.8
FOXN3O00409 MTND1P37-201ENST00000636562 264 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 Z99571.1-201ENST00000636677 394 ntBASIC3.79□□□□□ -1.8
FOXN3O00409 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.79□□□□□ -1.8
FOXN3O00409 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXN3O00409 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
FOXN3O00409 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXN3O00409 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.79□□□□□ -1.8
FOXN3O00409 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXN3O00409 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
FOXN3O00409 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
FOXN3O00409 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
FOXN3O00409 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FOXN3O00409 CUL1P1-201ENST00000509510 2425 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
FOXN3O00409 FRG1CP-201ENST00000358464 769 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 Y_RNA.255-201ENST00000364581 97 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 SNORA48.8-201ENST00000391324 134 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 RPL21P17-201ENST00000397467 475 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 RPS4XP3-201ENST00000398541 413 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
FOXN3O00409 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.78□□□□□ -1.8
FOXN3O00409 RNU2-33P-201ENST00000410344 192 ntBASIC3.78□□□□□ -1.8
FOXN3O00409 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.78□□□□□ -1.8
FOXN3O00409 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms