Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AC004908.2-201ENST00000609090 574 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AC013476.2-201ENST00000614456 459 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 SDR42E1P2-201ENST00000614861 481 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 AC097655.1-201ENST00000635075 318 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 MTND5P7-201ENST00000413558 1798 ntBASIC2.49□□□□□ -2.01
SMIM28A0A1B0GU29 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 U8.2-201ENST00000363156 134 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 RNU5A-8P-201ENST00000364102 114 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 U8.8-201ENST00000365399 135 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 RN7SKP223-201ENST00000410582 62 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 RPL21P24-201ENST00000413752 448 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 MTND5P25-201ENST00000430499 799 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AC118469.1-201ENST00000442943 488 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 MTND2P24-201ENST00000453434 806 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AC010631.1-201ENST00000474150 156 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 RNU6-56P-201ENST00000516986 93 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AP002748.2-201ENST00000528671 348 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AC123904.2-201ENST00000548059 300 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 ACTR3BP3-201ENST00000565577 979 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AC145350.1-201ENST00000567426 208 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AC135628.1-201ENST00000568867 534 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AL356432.3-201ENST00000568952 465 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AC068135.2-201ENST00000569293 1028 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 MIR3609-201ENST00000582661 80 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AC078899.3-201ENST00000599065 212 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 WISP1-OT1-201ENST00000602893 642 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AC068790.3-201ENST00000602988 553 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 U73023.1-201ENST00000603134 700 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 DPPA3P3-201ENST00000603842 430 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AC105129.3-201ENST00000605455 485 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AC087241.4-201ENST00000612441 480 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 MIR7844-201ENST00000616161 122 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 MIR4275-201ENST00000636486 87 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 AL445523.1-201ENST00000451184 1362 ntBASIC2.48□□□□□ -2.01
SMIM28A0A1B0GU29 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AC138915.1-201ENST00000565427 1685 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AL049641.1-201ENST00000441055 1948 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 Y_RNA.169-201ENST00000363745 96 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 RNU6-501P-201ENST00000364072 100 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AL591416.1-201ENST00000404015 867 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 MTCYBP36-201ENST00000404146 440 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AL359634.1-202ENST00000404721 284 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 TXNP7-201ENST00000406296 293 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 RNU4-72P-201ENST00000410754 173 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 RN7SKP284-201ENST00000411002 343 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 SPA17P1-201ENST00000416656 452 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 HMGN2P30-201ENST00000423237 256 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AC007919.1-201ENST00000429380 217 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AL356867.1-201ENST00000429623 299 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AL139415.2-201ENST00000431968 163 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AC010153.1-201ENST00000432862 727 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 BMI1P1-201ENST00000445879 941 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 RNU7-59P-201ENST00000459101 61 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 RPS20P20-201ENST00000460498 340 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 BZW1P2-201ENST00000473537 826 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 RPS27P27-201ENST00000498779 255 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AC009901.1-201ENST00000506703 541 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms