Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 RPL21P39-201ENST00000463605 483 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 RPL21P93-201ENST00000480465 489 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC233702.1-201ENST00000482905 502 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC109486.1-201ENST00000486833 374 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC093591.1-201ENST00000491435 481 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 RPL21P16-201ENST00000495531 483 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 RNU6-928P-201ENST00000516876 104 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 NRON-201ENST00000517270 370 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 MTND4LP18-201ENST00000526864 291 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AL356432.3-201ENST00000568952 465 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AP005136.1-201ENST00000579765 429 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 MIR3118-1-201ENST00000581787 76 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AP000860.1-201ENST00000605250 559 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC007038.2-201ENST00000608095 740 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 OR10AB1P-201ENST00000609613 938 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC087241.4-201ENST00000612441 480 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC009159.1-201ENST00000618386 642 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AL603755.1-201ENST00000619504 163 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC090617.7-201ENST00000623952 126 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC091953.2-201ENST00000623979 160 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 AC006020.1-201ENST00000420179 1854 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 ZNF271P-202ENST00000465539 1970 ntBASIC1.96□□□□□ -2.1
TRAV40A0A0B4J280 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 ZNF658B-202ENST00000615961 3375 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 RNU1-73P-201ENST00000383971 164 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 RN7SKP140-201ENST00000411196 284 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 RPL19P1-201ENST00000411635 428 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AL135786.1-201ENST00000415892 214 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AC007283.2-201ENST00000424739 197 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AL031667.1-201ENST00000440222 725 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AL022238.1-201ENST00000442557 355 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AP1S2P1-201ENST00000457344 379 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AP000797.1-201ENST00000478870 387 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 RPL36AP51-201ENST00000487216 318 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 RPF2P2-201ENST00000504693 896 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AC026436.1-201ENST00000510537 270 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 RNU6-56P-201ENST00000516986 93 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 RNU6-1003P-201ENST00000517099 105 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AC106038.2-201ENST00000520706 568 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AC068587.4-201ENST00000533893 186 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 PCMTD1P2-201ENST00000565017 355 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AF038458.1-201ENST00000588406 262 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 HMGN1P30-201ENST00000589286 268 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AC010620.2-201ENST00000600135 313 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 MIR1291-201ENST00000627649 87 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AC099654.13-201ENST00000639774 207 ntBASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TRAV40A0A0B4J280 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
TRAV40A0A0B4J280 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TRAV40A0A0B4J280 MAPK10-322ENST00000641485 4530 ntBASIC1.94□□□□□ -2.1
TRAV40A0A0B4J280 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TRAV40A0A0B4J280 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.94□□□□□ -2.1
TRAV40A0A0B4J280 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TRAV40A0A0B4J280 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TRAV40A0A0B4J280 RNU5E-5P-201ENST00000365379 116 ntBASIC1.94□□□□□ -2.1
TRAV40A0A0B4J280 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.94□□□□□ -2.1
TRAV40A0A0B4J280 SNORD116-8-201ENST00000384365 95 ntBASIC1.94□□□□□ -2.1
TRAV40A0A0B4J280 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TRAV40A0A0B4J280 RNU6-1197P-201ENST00000391183 107 ntBASIC1.94□□□□□ -2.1
TRAV40A0A0B4J280 BTF3P7-201ENST00000407097 488 ntBASIC1.94□□□□□ -2.1
TRAV40A0A0B4J280 RNA5SP425-201ENST00000410336 112 ntBASIC1.94□□□□□ -2.1
TRAV40A0A0B4J280 RNU4-65P-201ENST00000410473 140 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms