Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 MIR3167-201ENST00000579623 85 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AC091152.3-201ENST00000604227 325 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AC068276.1-201ENST00000605793 379 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AC004908.2-201ENST00000609090 574 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AC107294.1-201ENST00000609524 467 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AC107075.1-201ENST00000613695 314 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AP000676.3-201ENST00000623299 569 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AC244517.12-201ENST00000623581 663 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 PCMTD1P7-201ENST00000634506 357 ntBASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RHBDD3Q9Y3P4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 RPL21P132-201ENST00000331267 462 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 MIR147B-201ENST00000390185 80 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 RNU2-63P-201ENST00000410792 194 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 USP9YP6-201ENST00000413550 854 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 RPL21P24-201ENST00000413752 448 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 AL353729.1-201ENST00000425044 720 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 PTGES3P4-201ENST00000426243 356 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 AC093106.2-201ENST00000428212 385 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 GPM6BP2-201ENST00000432046 144 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 GPM6BP1-201ENST00000446387 144 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 AC069306.1-201ENST00000507006 843 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 AC008526.1-201ENST00000509149 338 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 AC093809.1-201ENST00000509155 340 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 AF213884.2-201ENST00000510417 903 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 AC112198.4-201ENST00000515450 351 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 RNA5SP216-201ENST00000516111 123 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 RNU6-703P-201ENST00000516946 107 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 AP000889.2-201ENST00000532684 490 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 AC234778.2-201ENST00000566241 354 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 AP001269.3-201ENST00000588718 329 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 AL161798.1-201ENST00000604630 131 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 AC009487.4-201ENST00000624969 3585 ntBASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.05□□□□□ -2.08
RHBDD3Q9Y3P4 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 RNU6-525P-201ENST00000363685 104 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 SNORD114-30-201ENST00000364448 72 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 Y_RNA.311-201ENST00000365068 96 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 RNU1-148P-201ENST00000384472 162 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 RPS4XP8-201ENST00000402039 771 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 MTND1P23-201ENST00000416931 372 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AC010153.1-201ENST00000432862 727 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 UBE2D3P1-201ENST00000436669 444 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 RPL23AP76-201ENST00000441860 458 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 GPM6BP3-201ENST00000442797 145 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 PSPHP1-201ENST00000450062 261 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AC117503.1-201ENST00000472241 394 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AC126389.1-201ENST00000477436 290 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AL049873.1-201ENST00000480540 376 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 RPS27P21-201ENST00000486977 252 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AC068781.1-201ENST00000488231 618 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AC021269.2-201ENST00000532318 330 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AC027176.1-201ENST00000560204 514 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 MTND3P13-201ENST00000574391 343 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AC005261.5-201ENST00000596280 355 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AC103810.6-201ENST00000606708 136 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AP001486.3-201ENST00000615334 372 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 MIR1291-201ENST00000627649 87 ntBASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.04□□□□□ -2.08
RHBDD3Q9Y3P4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 OR5H15-201ENST00000383696 930 ntBASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 ISCA1P1-201ENST00000426679 387 ntBASIC2.03□□□□□ -2.08
RHBDD3Q9Y3P4 AC018634.1-201ENST00000437554 401 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms