Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 AP002791.1-201ENST00000623291 381 ntBASIC1.41□□□□□ -2.18
RNF11Q9Y3C5 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.41□□□□□ -2.18
RNF11Q9Y3C5 ZNF849P-201ENST00000594711 1566 ntBASIC1.41□□□□□ -2.18
RNF11Q9Y3C5 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
RNF11Q9Y3C5 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
RNF11Q9Y3C5 CDC27P3-201ENST00000635418 1910 ntBASIC1.4□□□□□ -2.18
RNF11Q9Y3C5 OR4G2P-202ENST00000641004 1759 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 SNORA67.6-201ENST00000391093 99 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 MIR888-201ENST00000401186 77 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 AL139098.1-201ENST00000407291 389 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 AC018630.2-202ENST00000422992 927 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 RPS3AP44-201ENST00000425466 790 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 ZNF863P-201ENST00000426746 417 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 AL121890.1-201ENST00000435457 205 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 GTF2IP7-202ENST00000436677 309 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 HSPE1P24-201ENST00000450782 238 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 RPL26P9-201ENST00000457466 433 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 snoU109.1-201ENST00000459339 135 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 AL049874.1-201ENST00000489560 388 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 LTV1P1-201ENST00000510683 1237 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 RNA5SP291-201ENST00000517222 105 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 ARL2BPP2-201ENST00000550907 489 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 AC098826.3-201ENST00000603823 466 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 AL355297.2-201ENST00000604792 129 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 AC068276.1-201ENST00000605793 379 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 AC007038.2-201ENST00000608095 740 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 AC108479.2-201ENST00000617314 601 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 AC109809.1-201ENST00000619665 545 ntBASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.4□□□□□ -2.19
RNF11Q9Y3C5 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 RNU6-1159P-201ENST00000362933 107 ntBASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 SNORD51.1-201ENST00000365405 77 ntBASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 U6atac.2-201ENST00000408644 118 ntBASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 MTCO1P48-201ENST00000448024 1096 ntBASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 RPL23AP3-201ENST00000453844 468 ntBASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 AC025181.1-201ENST00000477507 416 ntBASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 AC117522.2-201ENST00000510049 657 ntBASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 SNORA31.22-201ENST00000517204 135 ntBASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 AC105245.1-201ENST00000581934 244 ntBASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 AP000238.1-201ENST00000608759 426 ntBASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RNF11Q9Y3C5 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 MIR218-1-201ENST00000384999 110 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AC007098.1-201ENST00000420122 367 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 MTND4P24-201ENST00000424002 397 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 PSMA6P3-201ENST00000428242 164 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AC241584.1-201ENST00000438469 1241 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AC002542.1-201ENST00000440683 193 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AL357134.1-201ENST00000445848 426 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AL050341.1-201ENST00000447743 313 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 MTND2P24-201ENST00000453434 806 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 RPS29P23-201ENST00000458635 123 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AL121769.1-201ENST00000469473 401 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AC084024.2-201ENST00000503480 791 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AC008526.1-201ENST00000509149 338 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 SNORA31.24-201ENST00000517232 57 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 LINC00933-203ENST00000559812 219 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 MIR4299-201ENST00000577899 72 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AP000403.1-201ENST00000603349 851 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AC104763.3-201ENST00000613765 618 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 MIR6130-201ENST00000619419 109 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AC091304.6-201ENST00000619761 202 ntBASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.38□□□□□ -2.19
RNF11Q9Y3C5 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RNF11Q9Y3C5 RNU1-62P-201ENST00000362599 164 ntBASIC1.37□□□□□ -2.19
RNF11Q9Y3C5 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
RNF11Q9Y3C5 AL033519.2-201ENST00000403958 392 ntBASIC1.37□□□□□ -2.19
RNF11Q9Y3C5 AL356432.1-201ENST00000405809 419 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms