Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 AL450472.3-201ENST00000615578 367 ntBASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 FRG1KP-201ENST00000623592 341 ntBASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 AC018692.3-201ENST00000623929 123 ntBASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AL513302.2-201ENST00000562313 1842 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 Y_RNA.481-201ENST00000384373 102 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 MRPS10P2-201ENST00000431226 381 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 RPL26P6-201ENST00000440913 438 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AC003071.1-201ENST00000451219 789 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AC013267.1-201ENST00000458227 267 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AC096576.1-201ENST00000489014 359 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 RPS15AP36-201ENST00000492022 382 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AC019235.1-201ENST00000503847 207 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AC114797.1-201ENST00000514003 728 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 SNORA31.1-201ENST00000515993 133 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 RNU6-718P-201ENST00000516166 105 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 SNORA31.5-201ENST00000516190 133 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 RNU6-410P-201ENST00000517006 107 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 PSMA2P1-201ENST00000526365 646 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AC128657.1-201ENST00000549459 145 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AC007363.1-201ENST00000604736 620 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AC092954.2-201ENST00000609103 430 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AC017083.3-201ENST00000609955 700 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 SNORD39.4-201ENST00000620099 78 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AC009161.2-201ENST00000624626 138 ntBASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC5.09□□□□□ -1.59
CDK11AQ9UQ88 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
CDK11AQ9UQ88 AC073073.2-201ENST00000609827 2578 ntBASIC5.09□□□□□ -1.6
CDK11AQ9UQ88 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 SNORD56.2-201ENST00000363242 71 ntBASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 RNU6-1085P-201ENST00000363576 107 ntBASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 RNU6-76P-201ENST00000384060 104 ntBASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 SNORA44-201ENST00000384584 132 ntBASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 CALM2P3-201ENST00000400429 449 ntBASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 RNA5SP38-201ENST00000410750 119 ntBASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 RNA5SP107-201ENST00000411358 122 ntBASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 UBE2FP1-201ENST00000416536 447 ntBASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 AC016696.1-201ENST00000446949 318 ntBASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 RPL23AP20-201ENST00000447965 421 ntBASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 FGF7P6-202ENST00000451282 293 ntBASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 RPL23AP94-201ENST00000512518 302 ntBASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 RNU6-64P-201ENST00000517119 105 ntBASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 AL512310.1-201ENST00000548639 172 ntBASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 HMGB1P33-201ENST00000563485 527 ntBASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CDK11AQ9UQ88 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 HSPE1P11-201ENST00000339579 310 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 SNORA7.4-201ENST00000384249 137 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AL391417.1-201ENST00000404100 426 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 RPL5P18-201ENST00000406671 891 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 MTCO2P19-201ENST00000427513 598 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 RPL23AP69-201ENST00000431134 458 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AL139415.2-201ENST00000431968 163 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AC107083.1-201ENST00000439643 279 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AC005094.1-201ENST00000440420 368 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 TXNP1-201ENST00000441872 371 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 MTCO2P3-201ENST00000442543 421 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AL162389.1-201ENST00000449233 177 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 ELOCP23-201ENST00000452014 332 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 MTND2P24-201ENST00000453434 806 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AC090572.1-201ENST00000519251 160 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 MTCO3P24-201ENST00000572729 782 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms