Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.96□□□□□ -1.78
MKS1Q9NXB0 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.96□□□□□ -1.78
MKS1Q9NXB0 AC091135.1-201ENST00000585943 307 ntBASIC3.96□□□□□ -1.78
MKS1Q9NXB0 AC005261.5-201ENST00000596280 355 ntBASIC3.96□□□□□ -1.78
MKS1Q9NXB0 AC073539.2-201ENST00000597113 165 ntBASIC3.96□□□□□ -1.78
MKS1Q9NXB0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.96□□□□□ -1.78
MKS1Q9NXB0 AC021646.1-201ENST00000605469 484 ntBASIC3.96□□□□□ -1.78
MKS1Q9NXB0 Z82243.1-201ENST00000609432 473 ntBASIC3.96□□□□□ -1.78
MKS1Q9NXB0 U7.8-201ENST00000619968 63 ntBASIC3.96□□□□□ -1.78
MKS1Q9NXB0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.96□□□□□ -1.78
MKS1Q9NXB0 Z82217.1-201ENST00000625157 8149 ntBASIC3.96□□□□□ -1.78
MKS1Q9NXB0 ZNF826P-207ENST00000622273 1910 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 CUL1P1-201ENST00000509510 2425 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 RNU1-132P-201ENST00000364300 164 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 SNORD81.2-201ENST00000365153 76 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 RNU6-831P-201ENST00000384548 107 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 RNU6-140P-201ENST00000384566 108 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 EIF4E2P1-201ENST00000393781 255 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 RPS4XP7-201ENST00000406274 780 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 RN7SKP32-201ENST00000410167 303 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 MTND3P8-201ENST00000412909 339 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 COX6B1P7-201ENST00000430845 235 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 SNRPEP9-201ENST00000436794 238 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 HMGN2P20-201ENST00000437531 273 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 MTND1P11-201ENST00000456661 876 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 RNA5SP310-201ENST00000459084 116 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 RNU7-66P-201ENST00000459469 62 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 AC022493.1-201ENST00000492984 337 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 AC111000.3-201ENST00000508057 576 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 RNA5SP165-201ENST00000517142 115 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 AC022690.1-201ENST00000526681 550 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 FGF7P1-201ENST00000582820 288 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 AC004805.2-201ENST00000605382 482 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 AC104985.2-201ENST00000620598 500 ntBASIC3.95□□□□□ -1.78
MKS1Q9NXB0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
MKS1Q9NXB0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MKS1Q9NXB0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
MKS1Q9NXB0 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
MKS1Q9NXB0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
MKS1Q9NXB0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
MKS1Q9NXB0 RAP1BP3-201ENST00000407180 549 ntBASIC3.94□□□□□ -1.78
MKS1Q9NXB0 RNU6-1025P-201ENST00000410629 104 ntBASIC3.94□□□□□ -1.78
MKS1Q9NXB0 RPL37P18-201ENST00000411602 243 ntBASIC3.94□□□□□ -1.78
MKS1Q9NXB0 AL590139.1-201ENST00000416267 400 ntBASIC3.94□□□□□ -1.78
MKS1Q9NXB0 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
MKS1Q9NXB0 RNU6-329P-201ENST00000459618 107 ntBASIC3.94□□□□□ -1.78
MKS1Q9NXB0 RN7SL604P-201ENST00000492589 296 ntBASIC3.94□□□□□ -1.78
MKS1Q9NXB0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.94□□□□□ -1.78
MKS1Q9NXB0 AC008716.1-201ENST00000511084 513 ntBASIC3.94□□□□□ -1.78
MKS1Q9NXB0 AC090136.1-201ENST00000520009 240 ntBASIC3.94□□□□□ -1.78
MKS1Q9NXB0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.94□□□□□ -1.78
MKS1Q9NXB0 AC090877.1-201ENST00000561418 344 ntBASIC3.94□□□□□ -1.78
MKS1Q9NXB0 MIR4742-201ENST00000581069 85 ntBASIC3.94□□□□□ -1.78
MKS1Q9NXB0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.94□□□□□ -1.78
MKS1Q9NXB0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.94□□□□□ -1.78
MKS1Q9NXB0 MIR3941-201ENST00000582572 103 ntBASIC3.94□□□□□ -1.78
MKS1Q9NXB0 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.94□□□□□ -1.78
MKS1Q9NXB0 ATP1B3P1-201ENST00000605365 821 ntBASIC3.94□□□□□ -1.78
MKS1Q9NXB0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.94□□□□□ -1.78
MKS1Q9NXB0 MIR7703-201ENST00000620784 77 ntBASIC3.94□□□□□ -1.78
MKS1Q9NXB0 AC005858.4-201ENST00000623191 700 ntBASIC3.94□□□□□ -1.78
MKS1Q9NXB0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.94□□□□□ -1.78
MKS1Q9NXB0 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.94□□□□□ -1.78
MKS1Q9NXB0 OR52H1-202ENST00000641796 1061 ntBASIC3.94□□□□□ -1.78
MKS1Q9NXB0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
MKS1Q9NXB0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
MKS1Q9NXB0 AC022336.2-201ENST00000568966 2538 ntBASIC3.93□□□□□ -1.78
MKS1Q9NXB0 AC118273.1-201ENST00000525324 3006 ntBASIC3.93□□□□□ -1.78
MKS1Q9NXB0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
MKS1Q9NXB0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.93□□□□□ -1.78
MKS1Q9NXB0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
MKS1Q9NXB0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.93□□□□□ -1.78
MKS1Q9NXB0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
MKS1Q9NXB0 Y_RNA.142-201ENST00000363491 102 ntBASIC3.93□□□□□ -1.78
MKS1Q9NXB0 Y_RNA.263-201ENST00000364659 114 ntBASIC3.93□□□□□ -1.78
MKS1Q9NXB0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms