Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2□□□□□ -2.09
SDHAF3Q9NRP4 AP000943.4-201ENST00000622912 357 ntBASIC2□□□□□ -2.09
SDHAF3Q9NRP4 AP003485.1-201ENST00000625093 753 ntBASIC2□□□□□ -2.09
SDHAF3Q9NRP4 AL159972.1-201ENST00000625150 448 ntBASIC2□□□□□ -2.09
SDHAF3Q9NRP4 MTND1P37-201ENST00000636562 264 ntBASIC2□□□□□ -2.09
SDHAF3Q9NRP4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2□□□□□ -2.09
SDHAF3Q9NRP4 RNU6-1078P-201ENST00000364522 103 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 SNORA23-201ENST00000365128 182 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 RNA5SP37-201ENST00000365420 130 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 RNU6-359P-201ENST00000365466 108 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 XGY1-201ENST00000381172 446 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 RNU6-637P-201ENST00000384050 107 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 RNU6-140P-201ENST00000384566 108 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 MTND4P3-201ENST00000417829 541 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 ZNF90P2-204ENST00000419323 1075 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 AC005005.2-201ENST00000420779 380 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 ZNF863P-201ENST00000426746 417 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 UBE2D3P1-201ENST00000436669 444 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 ARPC3P5-201ENST00000448802 534 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 MTCO1P42-201ENST00000457379 726 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 AC004263.1-201ENST00000479327 332 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 AC093752.1-206ENST00000511823 336 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 RPL23AP94-201ENST00000512518 302 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 SCARNA16.3-201ENST00000516595 184 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 RNU6-840P-201ENST00000517275 65 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 LRRC37A5P-203ENST00000580181 585 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 AC136601.2-201ENST00000604356 474 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 AC004908.2-201ENST00000609090 574 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 AC107294.1-201ENST00000609524 467 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 FTX_3.1-201ENST00000610451 147 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 AC013476.2-201ENST00000614456 459 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 AC093591.3-201ENST00000634516 308 ntBASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.99□□□□□ -2.09
SDHAF3Q9NRP4 RNA5SP125-201ENST00000364843 120 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 RNU1-148P-201ENST00000384472 162 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 SNORA40.2-201ENST00000390847 128 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 RPL23AP29-201ENST00000397284 453 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 TPMTP3-201ENST00000411928 735 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 HMGN2P19-201ENST00000425149 265 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 MTND4P6-201ENST00000438297 472 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 RPS20P22-201ENST00000473700 357 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 HMGB3P17-201ENST00000504195 649 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 OR6C7P-201ENST00000547875 934 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 AC078814.3-201ENST00000553036 491 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 BBIP1P1-201ENST00000602999 279 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 AC010678.1-201ENST00000614118 713 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 U4atac.1-201ENST00000618345 95 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 AP002791.1-201ENST00000623291 381 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 AL138713.1-201ENST00000624026 2130 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 AC126544.2-201ENST00000625174 749 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 MTND5P6-201ENST00000422338 1798 ntBASIC1.98□□□□□ -2.09
SDHAF3Q9NRP4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 HSPE1P11-201ENST00000339579 310 ntBASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 RNU6-884P-201ENST00000363889 107 ntBASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 RNU6-1207P-201ENST00000384343 107 ntBASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 MIR147B-201ENST00000390185 80 ntBASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 XKRYP1-201ENST00000423438 492 ntBASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 XKRYP2-201ENST00000432915 492 ntBASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 RPL21P134-201ENST00000453468 483 ntBASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 TRBV12-1-201ENST00000479785 344 ntBASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 AC107032.1-201ENST00000485945 480 ntBASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 AC008549.1-201ENST00000512900 643 ntBASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 RNA5SP291-201ENST00000517222 105 ntBASIC1.97□□□□□ -2.09
SDHAF3Q9NRP4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms