Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 HMGB3P21-201ENST00000452483 547 ntBASIC4.93□□□□□ -1.62
CNTNAP4Q9C0A0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.93□□□□□ -1.62
CNTNAP4Q9C0A0 AC100770.1-201ENST00000532310 322 ntBASIC4.93□□□□□ -1.62
CNTNAP4Q9C0A0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.93□□□□□ -1.62
CNTNAP4Q9C0A0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.93□□□□□ -1.62
CNTNAP4Q9C0A0 AC090115.3-201ENST00000553218 849 ntBASIC4.93□□□□□ -1.62
CNTNAP4Q9C0A0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.93□□□□□ -1.62
CNTNAP4Q9C0A0 AC009570.1-201ENST00000609599 745 ntBASIC4.93□□□□□ -1.62
CNTNAP4Q9C0A0 MIR6128-201ENST00000615528 109 ntBASIC4.93□□□□□ -1.62
CNTNAP4Q9C0A0 AC007485.1-201ENST00000616755 206 ntBASIC4.93□□□□□ -1.62
CNTNAP4Q9C0A0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.93□□□□□ -1.62
CNTNAP4Q9C0A0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.93□□□□□ -1.62
CNTNAP4Q9C0A0 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP4Q9C0A0 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CNTNAP4Q9C0A0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 MARK2P15-201ENST00000432204 2186 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 RNU6-188P-201ENST00000364207 107 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 Y_RNA.257-201ENST00000364596 102 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 MIR634-201ENST00000385208 97 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 MIR1251-201ENST00000408552 70 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 RNU6-1050P-201ENST00000410388 107 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 BX682237.1-201ENST00000415016 335 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 RNU7-167P-201ENST00000459160 62 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 RNU6-470P-201ENST00000515954 104 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 SNORA14.1-201ENST00000516113 141 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 RNU6-1069P-201ENST00000516612 133 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 RNU6-307P-201ENST00000516743 106 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 DEFB108D-201ENST00000527787 222 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 AC008521.1-201ENST00000587471 187 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 AC005357.1-201ENST00000588399 301 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 BNIP3P16-201ENST00000589779 534 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 AC006272.2-201ENST00000594725 163 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 SNHG22-203ENST00000617833 660 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 AC091925.2-201ENST00000625059 256 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 ZNF962P-201ENST00000443465 3140 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.92□□□□□ -1.62
CNTNAP4Q9C0A0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 AC074029.4-201ENST00000624796 1859 ntBASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 PRO1804-201ENST00000623780 2050 ntBASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 SET-203ENST00000372688 801 ntTSL 2 BASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 RNU6-1062P-201ENST00000383908 107 ntBASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 RNU6-434P-201ENST00000384376 107 ntBASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 SNORA3C-201ENST00000408792 125 ntBASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 RPL23AP33-201ENST00000442301 452 ntBASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 Y_RNA.661-201ENST00000516003 99 ntBASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 RNU6-475P-201ENST00000516073 104 ntBASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 AC025588.3-201ENST00000604182 274 ntBASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 AC018462.2-201ENST00000605375 395 ntBASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 AC137590.2-201ENST00000619709 240 ntBASIC4.91□□□□□ -1.62
CNTNAP4Q9C0A0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.9□□□□□ -1.62
CNTNAP4Q9C0A0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CNTNAP4Q9C0A0 PHKBP1-201ENST00000450951 1951 ntBASIC4.9□□□□□ -1.62
CNTNAP4Q9C0A0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 MTCO1P24-201ENST00000515438 1558 ntBASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 Y_RNA.428-201ENST00000384078 102 ntBASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 SNORA19-201ENST00000384737 128 ntBASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 RPLP0P7-201ENST00000416050 667 ntBASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 HMGB1P12-201ENST00000438594 598 ntBASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 RPS3AP46-201ENST00000448352 682 ntBASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 AC239809.1-201ENST00000450470 217 ntBASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 DYNLL1P5-201ENST00000467158 270 ntBASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 DEFB109F-201ENST00000491870 277 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms