Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RNU6-263P-201ENST00000363811 107 ntBASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 SNORD14.1-201ENST00000365609 90 ntBASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 MIR517A-201ENST00000385001 87 ntBASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 HSPE1P8-201ENST00000406997 288 ntBASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 RNU4-78P-201ENST00000410940 126 ntBASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 AL132838.2-201ENST00000492041 314 ntBASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 RNA5SP49-201ENST00000516450 115 ntBASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 AC104576.1-201ENST00000524225 88 ntBASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 AC109446.1-201ENST00000566172 220 ntBASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 AC091178.1-203ENST00000584586 279 ntBASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 SRGNP1-201ENST00000603392 451 ntBASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 AC104763.2-201ENST00000604179 382 ntBASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 MTND4LP5-201ENST00000605152 292 ntBASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 AC002044.1-201ENST00000606707 158 ntBASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 AC107871.2-201ENST00000612894 502 ntBASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.96□□□□□ -1.62
SYNGAP1Q96PV0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 RNA5SP432-201ENST00000362480 116 ntBASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 SNORA23-201ENST00000365128 182 ntBASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 Y_RNA.380-201ENST00000365663 111 ntBASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 RNU1-63P-201ENST00000383902 164 ntBASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 RNU6-209P-201ENST00000384118 107 ntBASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 Y_RNA.461-201ENST00000384263 103 ntBASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 MIR195-201ENST00000385194 87 ntBASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 RNU6-821P-201ENST00000390995 107 ntBASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 AL356095.1-201ENST00000417217 199 ntBASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 RNU7-187P-201ENST00000458985 68 ntBASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 AL592156.1-201ENST00000508758 304 ntBASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 AC022616.4-201ENST00000522985 181 ntBASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 HNRNPCP4-201ENST00000571636 900 ntBASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 HMGB2P1-201ENST00000591146 634 ntBASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 AC007619.2-201ENST00000605743 379 ntBASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 FAM27D1-201ENST00000612308 341 ntBASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 AC015967.1-201ENST00000619893 476 ntBASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.95□□□□□ -1.62
SYNGAP1Q96PV0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 RNU6-45P-201ENST00000384471 107 ntBASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 AC093578.1-201ENST00000415219 368 ntBASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 AL591704.1-201ENST00000432574 275 ntBASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 AL353997.1-201ENST00000432936 108 ntBASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 GEMIN8P3-201ENST00000445417 720 ntBASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 AL133547.1-201ENST00000448546 220 ntBASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 AL031274.1-201ENST00000450334 232 ntBASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 snoU109.4-201ENST00000458953 143 ntBASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 AC108022.1-201ENST00000493466 478 ntBASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 RN7SKP60-201ENST00000516985 239 ntBASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 AC091516.1-201ENST00000549191 703 ntBASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 TVP23BP1-201ENST00000557500 617 ntBASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 RN7SL600P-201ENST00000581811 299 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms