Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.34□□□□□ -1.71
ERCC4Q92889 RAC1P2-201ENST00000511164 579 ntBASIC4.34□□□□□ -1.71
ERCC4Q92889 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ERCC4Q92889 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.34□□□□□ -1.71
ERCC4Q92889 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.34□□□□□ -1.71
ERCC4Q92889 RN7SKP13-201ENST00000515933 244 ntBASIC4.34□□□□□ -1.71
ERCC4Q92889 RNU6-1231P-201ENST00000517185 103 ntBASIC4.34□□□□□ -1.71
ERCC4Q92889 AC090136.1-201ENST00000520009 240 ntBASIC4.34□□□□□ -1.71
ERCC4Q92889 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.34□□□□□ -1.71
ERCC4Q92889 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.34□□□□□ -1.71
ERCC4Q92889 Z82243.1-201ENST00000609432 473 ntBASIC4.34□□□□□ -1.71
ERCC4Q92889 Y_RNA.812-201ENST00000610788 101 ntBASIC4.34□□□□□ -1.71
ERCC4Q92889 AL365204.3-201ENST00000612448 685 ntBASIC4.34□□□□□ -1.71
ERCC4Q92889 Y_RNA.784-201ENST00000613803 101 ntBASIC4.34□□□□□ -1.71
ERCC4Q92889 Y_RNA.787-201ENST00000616522 101 ntBASIC4.34□□□□□ -1.71
ERCC4Q92889 Y_RNA.780-201ENST00000617336 101 ntBASIC4.34□□□□□ -1.71
ERCC4Q92889 Y_RNA.801-201ENST00000619005 101 ntBASIC4.34□□□□□ -1.71
ERCC4Q92889 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.34□□□□□ -1.71
ERCC4Q92889 AC092628.2-201ENST00000622492 339 ntBASIC4.34□□□□□ -1.71
ERCC4Q92889 AC007998.5-201ENST00000622938 237 ntBASIC4.34□□□□□ -1.71
ERCC4Q92889 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.34□□□□□ -1.71
ERCC4Q92889 MIR492-201ENST00000638676 116 ntBASIC4.34□□□□□ -1.71
ERCC4Q92889 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ERCC4Q92889 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.34□□□□□ -1.71
ERCC4Q92889 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.34□□□□□ -1.72
ERCC4Q92889 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ERCC4Q92889 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ERCC4Q92889 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERCC4Q92889 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.33□□□□□ -1.72
ERCC4Q92889 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.33□□□□□ -1.72
ERCC4Q92889 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERCC4Q92889 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.33□□□□□ -1.72
ERCC4Q92889 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 Y_RNA.138-201ENST00000363462 102 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 HSPE1P8-201ENST00000406997 288 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 POLHP1-201ENST00000411806 470 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.33□□□□□ -1.72
ERCC4Q92889 MTCO2P12-201ENST00000427426 682 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.33□□□□□ -1.72
ERCC4Q92889 AC018644.1-201ENST00000429934 551 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 RPS3AP52-201ENST00000435639 297 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 SNORA71B-202ENST00000439232 272 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.33□□□□□ -1.72
ERCC4Q92889 RPS15AP27-201ENST00000449183 343 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 RPL23AP55-201ENST00000498163 452 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.33□□□□□ -1.72
ERCC4Q92889 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.33□□□□□ -1.72
ERCC4Q92889 SNORA31.3-201ENST00000516029 96 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 SNORA25.17-201ENST00000517184 124 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.33□□□□□ -1.72
ERCC4Q92889 AP005597.4-201ENST00000526762 229 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 AP000889.2-201ENST00000532684 490 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 AC091516.1-201ENST00000549191 703 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.33□□□□□ -1.72
ERCC4Q92889 MIR3186-201ENST00000577404 85 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.33□□□□□ -1.72
ERCC4Q92889 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.33□□□□□ -1.72
ERCC4Q92889 XIAPP1-201ENST00000603162 600 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 uc_338.15-201ENST00000615470 191 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 AC103705.1-201ENST00000619013 241 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 AL589994.2-201ENST00000621124 579 ntBASIC4.33□□□□□ -1.72
ERCC4Q92889 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.33□□□□□ -1.72
ERCC4Q92889 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.33□□□□□ -1.72
ERCC4Q92889 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
ERCC4Q92889 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ERCC4Q92889 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ERCC4Q92889 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ERCC4Q92889 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ERCC4Q92889 Y_RNA.212-201ENST00000364177 102 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 RNU6-1013P-201ENST00000384180 107 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 RNU6-692P-201ENST00000384496 107 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 AL022722.2-201ENST00000402519 180 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 VN1R36P-201ENST00000414936 291 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 AC108032.1-201ENST00000416706 207 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 RPL21P109-201ENST00000422213 475 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 AC236972.2-201ENST00000434979 310 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 NDUFA5P4-201ENST00000436704 385 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.32□□□□□ -1.72
ERCC4Q92889 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.32□□□□□ -1.72
ERCC4Q92889 AC004801.2-202ENST00000463559 283 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.32□□□□□ -1.72
ERCC4Q92889 MTND4P17-201ENST00000470444 350 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 AC084198.1-201ENST00000477747 402 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.32□□□□□ -1.72
ERCC4Q92889 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.32□□□□□ -1.72
ERCC4Q92889 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.32□□□□□ -1.72
ERCC4Q92889 RN7SKP21-201ENST00000516503 220 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 RNU6-1088P-201ENST00000516850 104 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 MIR2116-201ENST00000517221 80 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.32□□□□□ -1.72
ERCC4Q92889 RANP3-201ENST00000530970 276 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.32□□□□□ -1.72
ERCC4Q92889 OR4H12P-201ENST00000556269 907 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 MTCO3P23-201ENST00000561363 289 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 AC007224.1-201ENST00000564410 144 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.32□□□□□ -1.72
ERCC4Q92889 PART1_1.1-201ENST00000611761 217 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 AC068724.3-201ENST00000625906 87 ntBASIC4.32□□□□□ -1.72
ERCC4Q92889 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
ERCC4Q92889 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms