Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 RNU6-1183P-201ENST00000517054 60 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC89Q8N998 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC89Q8N998 MIR4782-201ENST00000577987 79 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 AC138761.3-201ENST00000579993 334 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 AC012493.2-201ENST00000595083 291 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 AL031775.1-201ENST00000607014 887 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 AC022893.3-201ENST00000607665 437 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 uc_338.14-201ENST00000613162 166 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 AC027807.2-201ENST00000616099 408 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 AC009878.1-201ENST00000621819 340 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 MIR7157-201ENST00000635801 60 ntBASIC3.14□□□□□ -1.91
CCDC89Q8N998 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC89Q8N998 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC89Q8N998 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC89Q8N998 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC89Q8N998 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC89Q8N998 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
CCDC89Q8N998 HSPE1P11-201ENST00000339579 310 ntBASIC3.13□□□□□ -1.91
CCDC89Q8N998 U3.19-201ENST00000390893 196 ntBASIC3.13□□□□□ -1.91
CCDC89Q8N998 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC89Q8N998 RNU4-47P-201ENST00000410876 114 ntBASIC3.13□□□□□ -1.91
CCDC89Q8N998 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC89Q8N998 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC89Q8N998 AL591704.1-201ENST00000432574 275 ntBASIC3.13□□□□□ -1.91
CCDC89Q8N998 AC119618.1-201ENST00000434191 222 ntBASIC3.13□□□□□ -1.91
CCDC89Q8N998 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC89Q8N998 COX6CP2-201ENST00000444980 225 ntBASIC3.13□□□□□ -1.91
CCDC89Q8N998 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC89Q8N998 FAM133DP-201ENST00000464802 691 ntBASIC3.13□□□□□ -1.91
CCDC89Q8N998 AL121769.1-201ENST00000469473 401 ntBASIC3.13□□□□□ -1.91
CCDC89Q8N998 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC89Q8N998 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC89Q8N998 AC005178.1-201ENST00000508392 440 ntBASIC3.13□□□□□ -1.91
CCDC89Q8N998 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC89Q8N998 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC89Q8N998 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC89Q8N998 UBL5P2-201ENST00000583788 219 ntBASIC3.13□□□□□ -1.91
CCDC89Q8N998 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC89Q8N998 AL109618.2-201ENST00000605527 211 ntBASIC3.13□□□□□ -1.91
CCDC89Q8N998 AL355816.2-201ENST00000610049 647 ntBASIC3.13□□□□□ -1.91
CCDC89Q8N998 AC138749.5-201ENST00000611461 208 ntBASIC3.13□□□□□ -1.91
CCDC89Q8N998 AC116165.2-201ENST00000616705 206 ntBASIC3.13□□□□□ -1.91
CCDC89Q8N998 AC092140.2-201ENST00000618027 521 ntBASIC3.13□□□□□ -1.91
CCDC89Q8N998 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC89Q8N998 AC018692.3-201ENST00000623929 123 ntBASIC3.13□□□□□ -1.91
CCDC89Q8N998 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC89Q8N998 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC89Q8N998 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC89Q8N998 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC89Q8N998 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CCDC89Q8N998 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC89Q8N998 RNU5E-5P-201ENST00000365379 116 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 RNU6-946P-201ENST00000383878 107 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 MIR147B-201ENST00000390185 80 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC89Q8N998 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC89Q8N998 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC89Q8N998 Z99497.1-201ENST00000421282 135 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 AL158156.1-201ENST00000422509 473 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 AC093106.2-201ENST00000428212 385 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC89Q8N998 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC89Q8N998 Z75741.1-201ENST00000446793 314 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 AC023141.11-201ENST00000508864 202 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 AC002456.2-201ENST00000509356 380 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 AC098799.2-201ENST00000509466 868 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 MTND1P22-201ENST00000510572 951 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC89Q8N998 RNA5SP337-201ENST00000517007 109 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC89Q8N998 OR5BN1P-201ENST00000532955 829 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC89Q8N998 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC89Q8N998 AC023824.2-201ENST00000566185 400 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC89Q8N998 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC89Q8N998 AC083760.1-201ENST00000589621 670 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 AP000787.2-201ENST00000604432 568 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 AC018638.7-201ENST00000605836 1114 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC89Q8N998 Z99129.2-201ENST00000619967 314 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 AC084035.1-201ENST00000634543 607 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 U6.105-201ENST00000637379 88 ntBASIC3.12□□□□□ -1.91
CCDC89Q8N998 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC89Q8N998 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC89Q8N998 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC89Q8N998 Y_RNA.534-201ENST00000384599 112 ntBASIC3.11□□□□□ -1.91
CCDC89Q8N998 MIR449B-201ENST00000384995 97 ntBASIC3.11□□□□□ -1.91
CCDC89Q8N998 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.11□□□□□ -1.91
CCDC89Q8N998 PTGES3P4-201ENST00000426243 356 ntBASIC3.11□□□□□ -1.91
CCDC89Q8N998 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC89Q8N998 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC89Q8N998 COX6CP12-201ENST00000446748 202 ntBASIC3.11□□□□□ -1.91
CCDC89Q8N998 USP9YP12-201ENST00000450481 570 ntBASIC3.11□□□□□ -1.91
CCDC89Q8N998 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC89Q8N998 MTCO2P29-201ENST00000465212 189 ntBASIC3.11□□□□□ -1.91
CCDC89Q8N998 AC010587.1-201ENST00000505809 469 ntBASIC3.11□□□□□ -1.91
CCDC89Q8N998 AC091826.1-201ENST00000514065 313 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms