Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC138749.5-201ENST00000611461 208 ntBASIC2.99□□□□□ -1.93
CCDC60Q8IWA6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC60Q8IWA6 SDR42E1P2-201ENST00000614861 481 ntBASIC2.99□□□□□ -1.93
CCDC60Q8IWA6 AC008250.2-201ENST00000615261 205 ntBASIC2.99□□□□□ -1.93
CCDC60Q8IWA6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CCDC60Q8IWA6 AC116165.2-201ENST00000616705 206 ntBASIC2.99□□□□□ -1.93
CCDC60Q8IWA6 AP003122.6-201ENST00000623831 495 ntBASIC2.99□□□□□ -1.93
CCDC60Q8IWA6 AC091953.2-201ENST00000623979 160 ntBASIC2.99□□□□□ -1.93
CCDC60Q8IWA6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CCDC60Q8IWA6 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC60Q8IWA6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC60Q8IWA6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC60Q8IWA6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 FGF7P2-201ENST00000332473 296 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 U3.12-201ENST00000364498 214 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 RNU6-1027P-201ENST00000383998 107 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 RNA5SP252-201ENST00000391131 119 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 SNORA11.2-201ENST00000408318 127 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 AL356867.1-201ENST00000429623 299 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 NDUFB4P6-201ENST00000436819 366 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 AC005094.1-201ENST00000440420 368 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 RPS3P1-201ENST00000456781 192 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 RPL31P3-201ENST00000458430 332 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 AC126389.1-201ENST00000477436 290 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 ARL4AP2-201ENST00000507378 601 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 TTC39CP1-201ENST00000512513 755 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 AC007536.1-201ENST00000533382 349 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 RPL23AP84-201ENST00000571193 464 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 AC009977.1-201ENST00000586015 570 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 HMGN1P30-201ENST00000589286 268 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 AC097065.2-201ENST00000608159 533 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 AC092140.2-201ENST00000618027 521 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 AC006338.1-201ENST00000618453 749 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 SDAD1P2-201ENST00000441308 2028 ntBASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC60Q8IWA6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 ASNSP3-201ENST00000451989 1306 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 MAPK10-322ENST00000641485 4530 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 AC092104.1-201ENST00000497346 1441 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 MIR181B1-201ENST00000385240 110 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 SNORA40.3-201ENST00000390964 122 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 RNU6-1197P-201ENST00000391183 107 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 MRPL42P2-201ENST00000403169 426 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 RN7SKP140-201ENST00000411196 284 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 HMGN1P14-201ENST00000412459 517 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 MTCO2P16-201ENST00000436962 677 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 TAF9P1-201ENST00000445421 515 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 TAF9P2-201ENST00000454958 515 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 SNRPFP4-201ENST00000456366 242 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 RPS20P20-201ENST00000460498 340 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 RPS26P21-201ENST00000475397 348 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 MTND1P3-201ENST00000484956 952 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 SNORA9.3-201ENST00000516383 129 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 RN7SKP282-201ENST00000516824 299 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 AP003122.4-201ENST00000530980 758 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 AP002453.2-201ENST00000533503 320 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 RPL21P5-201ENST00000554662 472 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 MIR3118-1-201ENST00000581787 76 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 PIGPP4-201ENST00000584447 307 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 AC012119.1-201ENST00000603184 222 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 AC013553.2-201ENST00000604244 589 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 AP000860.1-201ENST00000605250 559 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 RNU6-87P-201ENST00000607561 108 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 AC025594.3-201ENST00000613068 790 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 AC090132.2-201ENST00000615881 347 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 AC099654.13-201ENST00000639774 207 ntBASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC60Q8IWA6 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 SNORD116-9-201ENST00000384000 95 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 SNORD116-3-201ENST00000384287 95 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 SNORD116-7-201ENST00000384404 95 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 SNORD116-5-201ENST00000384462 95 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms