Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RNU6-123P-201ENST00000516163 102 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 SNORA70.18-201ENST00000516696 98 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 OR5AL2P-201ENST00000532185 920 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 OR5BN1P-201ENST00000532955 829 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 AP003034.1-201ENST00000534621 422 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC38Q502W7 MIR4506-201ENST00000584693 77 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 AL158032.1-201ENST00000605401 106 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 AC084782.3-201ENST00000612282 578 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 AC099506.2-201ENST00000623074 221 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 AL157786.1-207ENST00000627771 695 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 SEPT14P19-203ENST00000633205 211 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 MIR6863-201ENST00000636112 90 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 U6.114-201ENST00000636407 96 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 Z99571.1-201ENST00000636677 394 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC38Q502W7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CCDC38Q502W7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC38Q502W7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC38Q502W7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC38Q502W7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CCDC38Q502W7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC38Q502W7 AC004972.1-201ENST00000623934 2209 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC38Q502W7 MAPK10-322ENST00000641485 4530 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CCDC38Q502W7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC38Q502W7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC38Q502W7 SNORA62.1-201ENST00000364287 154 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 RNU6-198P-201ENST00000384258 104 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 PTMAP2-201ENST00000397627 327 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 MIR888-201ENST00000401186 77 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 RPS4XP8-201ENST00000402039 771 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 RNU2-9P-201ENST00000410194 145 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC38Q502W7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC38Q502W7 DBIP2-201ENST00000419076 262 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC38Q502W7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC38Q502W7 DPPA2P1-201ENST00000428060 556 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 CALM2P2-201ENST00000428512 440 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 AC007389.2-201ENST00000434630 306 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC38Q502W7 AL031183.1-201ENST00000457667 207 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC38Q502W7 RN7SL283P-201ENST00000489055 303 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 AC109927.2-201ENST00000506416 303 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC38Q502W7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC38Q502W7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC38Q502W7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC38Q502W7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC38Q502W7 AC068135.2-201ENST00000569293 1028 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC38Q502W7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC38Q502W7 MIR4775-201ENST00000581168 75 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 AC008521.1-201ENST00000587471 187 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 AC008536.2-201ENST00000607284 349 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 MIR15A-201ENST00000607334 83 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 AC017083.3-201ENST00000609955 700 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 AP003355.3-201ENST00000623465 114 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC38Q502W7 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC38Q502W7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC38Q502W7 AL512643.1-201ENST00000635735 524 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CCDC38Q502W7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC38Q502W7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC38Q502W7 ZNF680P1-201ENST00000436625 1469 ntBASIC3.6□□□□□ -1.83
CCDC38Q502W7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC38Q502W7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC38Q502W7 GABRG2-229ENST00000641017 3628 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC38Q502W7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC38Q502W7 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC38Q502W7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC38Q502W7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC38Q502W7 Y_RNA.3-201ENST00000362331 103 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 SNORD9-201ENST00000362566 104 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 SNORD115-7-201ENST00000365306 82 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 MIR200C-201ENST00000384980 68 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC38Q502W7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC38Q502W7 AL035423.1-201ENST00000420331 213 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 AC069157.1-201ENST00000421749 137 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC38Q502W7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 MTND3P21-201ENST00000433774 331 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC38Q502W7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC38Q502W7 RPL23AP20-201ENST00000447965 421 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 PSPHP1-201ENST00000450062 261 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 AC092798.1-201ENST00000458542 409 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC38Q502W7 RANP3-201ENST00000530970 276 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC38Q502W7 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.59□□□□□ -1.83
CCDC38Q502W7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC38Q502W7 MIR3158-1-201ENST00000583596 81 ntBASIC3.59□□□□□ -1.83
CCDC38Q502W7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms