Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SNRPEP9-201ENST00000436794 238 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 AL121601.2-201ENST00000438019 707 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 RPL21P41-201ENST00000459863 264 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 RPL32P34-201ENST00000486380 400 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 RN7SL323P-201ENST00000494712 295 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 AC025465.4-201ENST00000513422 638 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 AC078814.3-201ENST00000553036 491 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 AL157871.3-201ENST00000557231 293 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 MIR548AC-201ENST00000585049 88 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 RNU6-89P-201ENST00000606519 100 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 Z82243.1-201ENST00000609432 473 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 ZNF285B-201ENST00000561698 1767 ntBASIC4.55□□□□□ -1.68
CCDC144BQ3MJ40 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AL136164.4-201ENST00000625013 2135 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 MAPK10-372ENST00000641954 3413 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 Y_RNA.33-201ENST00000362591 102 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 Y_RNA.72-201ENST00000362894 103 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 Y_RNA.100-201ENST00000363141 102 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 Y_RNA.399-201ENST00000383955 105 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 RNU6-217P-201ENST00000384164 104 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 SNORD70.1-201ENST00000391007 85 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 RPL21P17-201ENST00000397467 475 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AL356776.1-201ENST00000406574 447 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 SNORA11.1-201ENST00000408133 129 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 SNORA57.3-201ENST00000411095 141 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AC093578.1-201ENST00000415219 368 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AL158156.1-201ENST00000422509 473 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AC012498.1-201ENST00000424037 437 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AL513185.2-201ENST00000425543 193 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AL590664.1-201ENST00000448065 339 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 CECR9-201ENST00000453421 199 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AP003122.3-201ENST00000526316 255 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 CENPUP1-201ENST00000526649 1202 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AC084851.1-201ENST00000529105 249 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AC011602.1-201ENST00000546484 331 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AC091516.1-201ENST00000549191 703 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AC069200.1-201ENST00000609511 323 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 U2.17-201ENST00000611454 95 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AC099506.2-201ENST00000623074 221 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 HSPA8P4-201ENST00000511877 1920 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 AL161912.2-201ENST00000565707 3007 ntBASIC4.54□□□□□ -1.68
CCDC144BQ3MJ40 OTUD4P1-201ENST00000237841 3067 ntBASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 Z82217.1-201ENST00000625157 8149 ntBASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 RNU6-715P-201ENST00000365204 103 ntBASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 RNU4-20P-201ENST00000365601 151 ntBASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 Y_RNA.390-201ENST00000383932 102 ntBASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 RNU6-332P-201ENST00000391193 108 ntBASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 RPS15AP27-201ENST00000449183 343 ntBASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 AC004801.2-202ENST00000463559 283 ntBASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 AL135752.1-201ENST00000479477 471 ntBASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 Y_RNA.654-201ENST00000497848 106 ntBASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 MTCYBP18-201ENST00000501056 747 ntBASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 RNA5SP165-201ENST00000517142 115 ntBASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 CYCSP30-201ENST00000546447 172 ntBASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 AL121579.1-201ENST00000555129 305 ntBASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 MIR4644-201ENST00000579929 84 ntBASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 MIR3609-201ENST00000582661 80 ntBASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 AC104662.1-201ENST00000604448 511 ntBASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 AC004805.2-201ENST00000605382 482 ntBASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC144BQ3MJ40 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms