Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RAB40BQ12829 AL365184.2-201ENST00000431139 435 ntBASIC2.38□□□□□ -2.03
RAB40BQ12829 RPL23AP20-201ENST00000447965 421 ntBASIC2.38□□□□□ -2.03
RAB40BQ12829 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.38□□□□□ -2.03
RAB40BQ12829 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.38□□□□□ -2.03
RAB40BQ12829 RBM43P1-201ENST00000476891 1081 ntBASIC2.38□□□□□ -2.03
RAB40BQ12829 RPS27AP10-201ENST00000496103 208 ntBASIC2.38□□□□□ -2.03
RAB40BQ12829 RPS27P27-201ENST00000498779 255 ntBASIC2.38□□□□□ -2.03
RAB40BQ12829 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RAB40BQ12829 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.38□□□□□ -2.03
RAB40BQ12829 AF131216.2-201ENST00000512316 564 ntBASIC2.38□□□□□ -2.03
RAB40BQ12829 RNU6-1129P-201ENST00000515964 104 ntBASIC2.38□□□□□ -2.03
RAB40BQ12829 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.38□□□□□ -2.03
RAB40BQ12829 AC022616.6-201ENST00000520479 119 ntBASIC2.38□□□□□ -2.03
RAB40BQ12829 OR5BN1P-201ENST00000532955 829 ntBASIC2.38□□□□□ -2.03
RAB40BQ12829 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.38□□□□□ -2.03
RAB40BQ12829 AC128657.1-201ENST00000549459 145 ntBASIC2.38□□□□□ -2.03
RAB40BQ12829 ZNF321P-202ENST00000550843 495 ntBASIC2.38□□□□□ -2.03
RAB40BQ12829 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
RAB40BQ12829 MIR4325-201ENST00000583049 90 ntBASIC2.38□□□□□ -2.03
RAB40BQ12829 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.38□□□□□ -2.03
RAB40BQ12829 AC121334.2-201ENST00000605387 271 ntBASIC2.38□□□□□ -2.03
RAB40BQ12829 AC107294.1-201ENST00000609524 467 ntBASIC2.38□□□□□ -2.03
RAB40BQ12829 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
RAB40BQ12829 AC004223.4-201ENST00000612426 332 ntBASIC2.38□□□□□ -2.03
RAB40BQ12829 AL162274.2-201ENST00000614406 332 ntBASIC2.38□□□□□ -2.03
RAB40BQ12829 uc_338.12-201ENST00000616344 181 ntBASIC2.38□□□□□ -2.03
RAB40BQ12829 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RAB40BQ12829 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.38□□□□□ -2.03
RAB40BQ12829 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RAB40BQ12829 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.38□□□□□ -2.03
RAB40BQ12829 MAPK10-266ENST00000641066 6555 ntBASIC2.38□□□□□ -2.03
RAB40BQ12829 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.37□□□□□ -2.03
RAB40BQ12829 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
RAB40BQ12829 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RAB40BQ12829 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.37□□□□□ -2.03
RAB40BQ12829 RNU5F-7P-201ENST00000363696 115 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 SNORD56.5-201ENST00000364281 72 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 RNY4P16-201ENST00000364768 94 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
RAB40BQ12829 RNU6-533P-201ENST00000384144 107 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
RAB40BQ12829 FO393413.1-201ENST00000402892 195 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 AL021407.1-201ENST00000404531 386 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 RNA5SP181-201ENST00000410246 98 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.37□□□□□ -2.03
RAB40BQ12829 AC023141.4-201ENST00000412031 328 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 NDUFS5P4-201ENST00000412983 318 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
RAB40BQ12829 RAC1P6-201ENST00000423911 575 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 RPL36AP53-201ENST00000432891 316 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.37□□□□□ -2.03
RAB40BQ12829 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.37□□□□□ -2.03
RAB40BQ12829 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.37□□□□□ -2.03
RAB40BQ12829 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.37□□□□□ -2.03
RAB40BQ12829 AC112204.1-201ENST00000502591 103 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 SNORA31.3-201ENST00000516029 96 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 AP006587.4-201ENST00000526053 529 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.37□□□□□ -2.03
RAB40BQ12829 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RAB40BQ12829 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.37□□□□□ -2.03
RAB40BQ12829 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
RAB40BQ12829 GLYCAM1-201ENST00000546596 285 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 ZNF519P3-201ENST00000557158 1032 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 MTATP6P24-201ENST00000576835 677 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.37□□□□□ -2.03
RAB40BQ12829 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 AP000860.1-201ENST00000605250 559 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 AC007619.2-201ENST00000605743 379 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 AC013562.2-201ENST00000611632 603 ntBASIC2.37□□□□□ -2.03
RAB40BQ12829 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
RAB40BQ12829 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
RAB40BQ12829 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
RAB40BQ12829 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
RAB40BQ12829 RNU6-1180P-201ENST00000364935 107 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 RNU1-73P-201ENST00000383971 164 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 MTCYBP36-201ENST00000404146 440 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 AL139095.1-201ENST00000404326 391 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.36□□□□□ -2.03
RAB40BQ12829 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.36□□□□□ -2.03
RAB40BQ12829 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.36□□□□□ -2.03
RAB40BQ12829 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.36□□□□□ -2.03
RAB40BQ12829 AC006366.1-201ENST00000422002 759 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 BPY2DP-201ENST00000422208 265 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 SKA2P1-201ENST00000425592 390 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.36□□□□□ -2.03
RAB40BQ12829 AL512286.1-201ENST00000439244 400 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 NEFMP1-201ENST00000443423 1006 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 AL671855.1-201ENST00000446875 1203 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RAB40BQ12829 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 ZNF114P1-201ENST00000453500 292 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 FABP5P15-201ENST00000453566 214 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 CACYBPP2-201ENST00000453625 678 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 SSXP1-201ENST00000453640 473 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 RPL23AP70-201ENST00000483361 460 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms