Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.85□□□□□ -1.63
HDLBPQ00341 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDLBPQ00341 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HDLBPQ00341 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
HDLBPQ00341 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
HDLBPQ00341 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDLBPQ00341 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HDLBPQ00341 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HDLBPQ00341 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.84□□□□□ -1.63
HDLBPQ00341 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HDLBPQ00341 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HDLBPQ00341 RNU1-15P-201ENST00000353977 144 ntBASIC4.84□□□□□ -1.63
HDLBPQ00341 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HDLBPQ00341 Y_RNA.813-201ENST00000364639 102 ntBASIC4.84□□□□□ -1.63
HDLBPQ00341 SNORA4.3-201ENST00000365564 137 ntBASIC4.84□□□□□ -1.63
HDLBPQ00341 RNU6-1197P-201ENST00000391183 107 ntBASIC4.84□□□□□ -1.63
HDLBPQ00341 MIR450B-201ENST00000401182 78 ntBASIC4.84□□□□□ -1.63
HDLBPQ00341 AC073063.1-201ENST00000434352 607 ntBASIC4.84□□□□□ -1.63
HDLBPQ00341 AC236972.2-201ENST00000434979 310 ntBASIC4.84□□□□□ -1.63
HDLBPQ00341 HMGB3P11-201ENST00000440127 604 ntBASIC4.84□□□□□ -1.63
HDLBPQ00341 RPS24P13-201ENST00000442520 397 ntBASIC4.84□□□□□ -1.63
HDLBPQ00341 AC107399.1-201ENST00000451226 265 ntBASIC4.84□□□□□ -1.63
HDLBPQ00341 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.84□□□□□ -1.63
HDLBPQ00341 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.84□□□□□ -1.63
HDLBPQ00341 RNU6-1069P-201ENST00000516612 133 ntBASIC4.84□□□□□ -1.63
HDLBPQ00341 YPEL5P3-201ENST00000547227 352 ntBASIC4.84□□□□□ -1.63
HDLBPQ00341 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.84□□□□□ -1.63
HDLBPQ00341 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.84□□□□□ -1.63
HDLBPQ00341 ZNF192P1-203ENST00000565888 810 ntBASIC4.84□□□□□ -1.63
HDLBPQ00341 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HDLBPQ00341 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HDLBPQ00341 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HDLBPQ00341 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
HDLBPQ00341 FAM35BP-202ENST00000497389 3337 ntBASIC4.84□□□□□ -1.64
HDLBPQ00341 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
HDLBPQ00341 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.83□□□□□ -1.64
HDLBPQ00341 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.83□□□□□ -1.64
HDLBPQ00341 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.83□□□□□ -1.64
HDLBPQ00341 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HDLBPQ00341 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HDLBPQ00341 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HDLBPQ00341 SNORA71.3-201ENST00000362582 128 ntBASIC4.83□□□□□ -1.64
HDLBPQ00341 RNU4-79P-201ENST00000362764 141 ntBASIC4.83□□□□□ -1.64
HDLBPQ00341 Y_RNA.387-201ENST00000383918 102 ntBASIC4.83□□□□□ -1.64
HDLBPQ00341 RNU6-1011P-201ENST00000384668 107 ntBASIC4.83□□□□□ -1.64
HDLBPQ00341 MIR493-201ENST00000385254 89 ntBASIC4.83□□□□□ -1.64
HDLBPQ00341 RPL21P109-201ENST00000422213 475 ntBASIC4.83□□□□□ -1.64
HDLBPQ00341 SNAP23P1-201ENST00000433229 246 ntBASIC4.83□□□□□ -1.64
HDLBPQ00341 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.83□□□□□ -1.64
HDLBPQ00341 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.83□□□□□ -1.64
HDLBPQ00341 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.83□□□□□ -1.64
HDLBPQ00341 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.83□□□□□ -1.64
HDLBPQ00341 KC877373.1-201ENST00000479066 408 ntBASIC4.83□□□□□ -1.64
HDLBPQ00341 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.83□□□□□ -1.64
HDLBPQ00341 RNU6-277P-201ENST00000516272 106 ntBASIC4.83□□□□□ -1.64
HDLBPQ00341 AC087854.1-201ENST00000519706 414 ntBASIC4.83□□□□□ -1.64
HDLBPQ00341 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.83□□□□□ -1.64
HDLBPQ00341 AC100770.1-201ENST00000532310 322 ntBASIC4.83□□□□□ -1.64
HDLBPQ00341 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.83□□□□□ -1.64
HDLBPQ00341 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.83□□□□□ -1.64
HDLBPQ00341 AC025946.2-201ENST00000603398 234 ntBASIC4.83□□□□□ -1.64
HDLBPQ00341 AC048347.1-201ENST00000624621 427 ntBASIC4.83□□□□□ -1.64
HDLBPQ00341 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HDLBPQ00341 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HDLBPQ00341 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HDLBPQ00341 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HDLBPQ00341 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HDLBPQ00341 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.82□□□□□ -1.64
HDLBPQ00341 RAB9AP3-201ENST00000412737 573 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 AC074085.1-201ENST00000413598 418 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.82□□□□□ -1.64
HDLBPQ00341 VN1R36P-201ENST00000414936 291 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 AL158156.1-201ENST00000422509 473 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 AC006946.1-201ENST00000429106 328 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 RAB9AP1-201ENST00000449393 573 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.82□□□□□ -1.64
HDLBPQ00341 Y_RNA.635-201ENST00000459041 101 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 snoU13.22-201ENST00000459428 104 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 RPL7P5-201ENST00000471472 736 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 RN7SL271P-201ENST00000487601 295 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 SUMO2P6-201ENST00000505273 288 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 HMGN1P13-201ENST00000505795 138 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 TBCAP3-201ENST00000512475 312 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 RNA5SP309-201ENST00000516670 106 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 RN7SKP289-201ENST00000517244 295 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.82□□□□□ -1.64
HDLBPQ00341 AP003122.3-201ENST00000526316 255 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 AC084851.1-201ENST00000529105 249 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.82□□□□□ -1.64
HDLBPQ00341 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.82□□□□□ -1.64
HDLBPQ00341 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.82□□□□□ -1.64
HDLBPQ00341 MIR3942-201ENST00000585264 109 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 AC023043.2-201ENST00000589678 1026 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 SNORA51-201ENST00000606420 132 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 AL121772.2-201ENST00000614331 297 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.82□□□□□ -1.64
HDLBPQ00341 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.82□□□□□ -1.64
HDLBPQ00341 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.82□□□□□ -1.64
HDLBPQ00341 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms