Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 U2.12-201ENST00000613778 191 ntBASIC1.41□□□□□ -2.18
CCL20P78556 U2.20-201ENST00000613956 192 ntBASIC1.41□□□□□ -2.18
CCL20P78556 U2.9-201ENST00000615427 191 ntBASIC1.41□□□□□ -2.18
CCL20P78556 U2.11-201ENST00000616345 191 ntBASIC1.41□□□□□ -2.18
CCL20P78556 U2.2-201ENST00000616535 191 ntBASIC1.41□□□□□ -2.18
CCL20P78556 U2.3-201ENST00000617785 191 ntBASIC1.41□□□□□ -2.18
CCL20P78556 U2.19-201ENST00000618602 191 ntBASIC1.41□□□□□ -2.18
CCL20P78556 RNU2-1-201ENST00000618664 191 ntBASIC1.41□□□□□ -2.18
CCL20P78556 U2.6-201ENST00000619225 191 ntBASIC1.41□□□□□ -2.18
CCL20P78556 U2.5-201ENST00000619465 191 ntBASIC1.41□□□□□ -2.18
CCL20P78556 U2.10-201ENST00000620268 191 ntBASIC1.41□□□□□ -2.18
CCL20P78556 MIR6873-201ENST00000622788 63 ntBASIC1.41□□□□□ -2.18
CCL20P78556 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CCL20P78556 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CCL20P78556 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CCL20P78556 AL390862.1-201ENST00000635467 1469 ntBASIC1.4□□□□□ -2.19
CCL20P78556 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CCL20P78556 RNU6-1159P-201ENST00000362933 107 ntBASIC1.4□□□□□ -2.19
CCL20P78556 Y_RNA.245-201ENST00000364493 95 ntBASIC1.4□□□□□ -2.19
CCL20P78556 MIR147B-201ENST00000390185 80 ntBASIC1.4□□□□□ -2.19
CCL20P78556 AL079342.1-201ENST00000401460 267 ntBASIC1.4□□□□□ -2.19
CCL20P78556 GSTA9P-201ENST00000406231 611 ntBASIC1.4□□□□□ -2.19
CCL20P78556 MTND3P20-201ENST00000407663 186 ntBASIC1.4□□□□□ -2.19
CCL20P78556 AC096664.2-201ENST00000411843 406 ntBASIC1.4□□□□□ -2.19
CCL20P78556 BTF3L4P3-201ENST00000418879 476 ntBASIC1.4□□□□□ -2.19
CCL20P78556 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.4□□□□□ -2.19
CCL20P78556 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.4□□□□□ -2.19
CCL20P78556 FO393414.1-201ENST00000428697 1184 ntBASIC1.4□□□□□ -2.19
CCL20P78556 MTCO1P3-201ENST00000429327 192 ntBASIC1.4□□□□□ -2.19
CCL20P78556 AC010153.1-201ENST00000432862 727 ntBASIC1.4□□□□□ -2.19
CCL20P78556 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.4□□□□□ -2.19
CCL20P78556 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.4□□□□□ -2.19
CCL20P78556 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.4□□□□□ -2.19
CCL20P78556 AL161651.1-201ENST00000440882 223 ntBASIC1.4□□□□□ -2.19
CCL20P78556 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.4□□□□□ -2.19
CCL20P78556 AL500527.1-201ENST00000448532 255 ntBASIC1.4□□□□□ -2.19
CCL20P78556 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.4□□□□□ -2.19
CCL20P78556 CECR9-201ENST00000453421 199 ntBASIC1.4□□□□□ -2.19
CCL20P78556 AP001324.2-201ENST00000461163 319 ntBASIC1.4□□□□□ -2.19
CCL20P78556 RPL21P99-201ENST00000480369 423 ntBASIC1.4□□□□□ -2.19
CCL20P78556 RPS3AP14-201ENST00000483907 780 ntBASIC1.4□□□□□ -2.19
CCL20P78556 AC096576.1-201ENST00000489014 359 ntBASIC1.4□□□□□ -2.19
CCL20P78556 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CCL20P78556 HMGB3P17-201ENST00000504195 649 ntBASIC1.4□□□□□ -2.19
CCL20P78556 SMURF2P1-201ENST00000514992 481 ntBASIC1.4□□□□□ -2.19
CCL20P78556 RNU1-103P-201ENST00000516502 125 ntBASIC1.4□□□□□ -2.19
CCL20P78556 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.4□□□□□ -2.19
CCL20P78556 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.4□□□□□ -2.19
CCL20P78556 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.4□□□□□ -2.19
CCL20P78556 AC006199.1-201ENST00000548728 219 ntBASIC1.4□□□□□ -2.19
CCL20P78556 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.4□□□□□ -2.19
CCL20P78556 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.4□□□□□ -2.19
CCL20P78556 AC021739.1-201ENST00000559631 174 ntBASIC1.4□□□□□ -2.19
CCL20P78556 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CCL20P78556 DEFB122-202ENST00000569013 197 ntBASIC1.4□□□□□ -2.19
CCL20P78556 MIR1254-2-201ENST00000579553 63 ntBASIC1.4□□□□□ -2.19
CCL20P78556 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.4□□□□□ -2.19
CCL20P78556 AC091152.3-201ENST00000604227 325 ntBASIC1.4□□□□□ -2.19
CCL20P78556 AC007179.3-201ENST00000604976 235 ntBASIC1.4□□□□□ -2.19
CCL20P78556 AC103710.1-201ENST00000610003 901 ntBASIC1.4□□□□□ -2.19
CCL20P78556 MIR7106-201ENST00000612419 65 ntBASIC1.4□□□□□ -2.19
CCL20P78556 AC009233.1-201ENST00000616477 371 ntBASIC1.4□□□□□ -2.19
CCL20P78556 AC109809.1-201ENST00000619665 545 ntBASIC1.4□□□□□ -2.19
CCL20P78556 AC019226.1-201ENST00000625666 515 ntBASIC1.4□□□□□ -2.19
CCL20P78556 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CCL20P78556 MTCO1P4-201ENST00000520516 1409 ntBASIC1.4□□□□□ -2.19
CCL20P78556 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CCL20P78556 RNU6-97P-201ENST00000363387 104 ntBASIC1.39□□□□□ -2.19
CCL20P78556 RNU6-343P-201ENST00000364709 104 ntBASIC1.39□□□□□ -2.19
CCL20P78556 RNU6-359P-201ENST00000365466 108 ntBASIC1.39□□□□□ -2.19
CCL20P78556 U8.14-201ENST00000390843 143 ntBASIC1.39□□□□□ -2.19
CCL20P78556 RPL22P22-201ENST00000395439 379 ntBASIC1.39□□□□□ -2.19
CCL20P78556 RNU2-42P-201ENST00000410697 113 ntBASIC1.39□□□□□ -2.19
CCL20P78556 RNU6-516P-201ENST00000411381 104 ntBASIC1.39□□□□□ -2.19
CCL20P78556 TPMTP2-201ENST00000414372 726 ntBASIC1.39□□□□□ -2.19
CCL20P78556 RPS24P7-201ENST00000416921 246 ntBASIC1.39□□□□□ -2.19
CCL20P78556 RPL31P63-201ENST00000422565 375 ntBASIC1.39□□□□□ -2.19
CCL20P78556 ELOCP14-201ENST00000428070 331 ntBASIC1.39□□□□□ -2.19
CCL20P78556 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CCL20P78556 AL445646.1-201ENST00000431784 216 ntBASIC1.39□□□□□ -2.19
CCL20P78556 MTND1P28-201ENST00000435623 950 ntBASIC1.39□□□□□ -2.19
CCL20P78556 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.39□□□□□ -2.19
CCL20P78556 PTGES3P1-201ENST00000439531 483 ntBASIC1.39□□□□□ -2.19
CCL20P78556 ELOCP7-201ENST00000439968 331 ntBASIC1.39□□□□□ -2.19
CCL20P78556 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.39□□□□□ -2.19
CCL20P78556 HMGN2P10-201ENST00000448085 265 ntBASIC1.39□□□□□ -2.19
CCL20P78556 AL353718.1-201ENST00000451028 517 ntBASIC1.39□□□□□ -2.19
CCL20P78556 RPL23AP3-201ENST00000453844 468 ntBASIC1.39□□□□□ -2.19
CCL20P78556 AC007182.2-201ENST00000489251 402 ntBASIC1.39□□□□□ -2.19
CCL20P78556 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.39□□□□□ -2.19
CCL20P78556 AC026414.1-201ENST00000504046 698 ntBASIC1.39□□□□□ -2.19
CCL20P78556 AC107393.1-201ENST00000512403 346 ntBASIC1.39□□□□□ -2.19
CCL20P78556 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.39□□□□□ -2.19
CCL20P78556 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.39□□□□□ -2.19
CCL20P78556 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.39□□□□□ -2.19
CCL20P78556 AC026616.1-201ENST00000523157 525 ntBASIC1.39□□□□□ -2.19
CCL20P78556 AC012435.1-202ENST00000568772 240 ntBASIC1.39□□□□□ -2.19
CCL20P78556 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.39□□□□□ -2.19
CCL20P78556 AC098483.2-201ENST00000603158 454 ntBASIC1.39□□□□□ -2.19
CCL20P78556 AL355297.2-201ENST00000604792 129 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms