Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
RFX3P48380 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.27□□□□□ -2.05
RFX3P48380 RNU5F-8P-201ENST00000515941 111 ntBASIC2.27□□□□□ -2.05
RFX3P48380 SNORA31.18-201ENST00000517043 134 ntBASIC2.27□□□□□ -2.05
RFX3P48380 AC068587.4-201ENST00000533893 186 ntBASIC2.27□□□□□ -2.05
RFX3P48380 AC136618.2-201ENST00000575091 400 ntBASIC2.27□□□□□ -2.05
RFX3P48380 AC060771.1-201ENST00000582031 164 ntBASIC2.27□□□□□ -2.05
RFX3P48380 MIR4435-1-201ENST00000582552 80 ntBASIC2.27□□□□□ -2.05
RFX3P48380 AL357094.1-201ENST00000603845 844 ntBASIC2.27□□□□□ -2.05
RFX3P48380 AC026790.2-201ENST00000606282 430 ntBASIC2.27□□□□□ -2.05
RFX3P48380 AC135507.1-201ENST00000607214 561 ntBASIC2.27□□□□□ -2.05
RFX3P48380 AC239868.4-201ENST00000608318 671 ntBASIC2.27□□□□□ -2.05
RFX3P48380 AC072039.2-201ENST00000608883 439 ntBASIC2.27□□□□□ -2.05
RFX3P48380 AP000484.1-201ENST00000620067 1252 ntBASIC2.27□□□□□ -2.05
RFX3P48380 AP000676.3-201ENST00000623299 569 ntBASIC2.27□□□□□ -2.05
RFX3P48380 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RFX3P48380 PABPC1P9-201ENST00000426076 1612 ntBASIC2.27□□□□□ -2.05
RFX3P48380 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.27□□□□□ -2.05
RFX3P48380 AL137003.2-201ENST00000606924 2538 ntBASIC2.27□□□□□ -2.05
RFX3P48380 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
RFX3P48380 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.26□□□□□ -2.05
RFX3P48380 AL359693.1-201ENST00000614959 2407 ntBASIC2.26□□□□□ -2.05
RFX3P48380 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RFX3P48380 CCNG1P1-201ENST00000406783 885 ntBASIC2.26□□□□□ -2.05
RFX3P48380 PIGPP2-201ENST00000411569 458 ntBASIC2.26□□□□□ -2.05
RFX3P48380 BTF3L4P3-201ENST00000418879 476 ntBASIC2.26□□□□□ -2.05
RFX3P48380 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.26□□□□□ -2.05
RFX3P48380 AL139413.1-201ENST00000421309 217 ntBASIC2.26□□□□□ -2.05
RFX3P48380 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.26□□□□□ -2.05
RFX3P48380 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.26□□□□□ -2.05
RFX3P48380 AL035407.1-201ENST00000429211 571 ntBASIC2.26□□□□□ -2.05
RFX3P48380 SNRPEP9-201ENST00000436794 238 ntBASIC2.26□□□□□ -2.05
RFX3P48380 RSU1P2-202ENST00000437884 485 ntBASIC2.26□□□□□ -2.05
RFX3P48380 MTCO3P45-201ENST00000443036 613 ntBASIC2.26□□□□□ -2.05
RFX3P48380 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.26□□□□□ -2.05
RFX3P48380 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.26□□□□□ -2.05
RFX3P48380 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.26□□□□□ -2.05
RFX3P48380 AL121769.1-201ENST00000469473 401 ntBASIC2.26□□□□□ -2.05
RFX3P48380 RPS27AP10-201ENST00000496103 208 ntBASIC2.26□□□□□ -2.05
RFX3P48380 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.26□□□□□ -2.05
RFX3P48380 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.26□□□□□ -2.05
RFX3P48380 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.26□□□□□ -2.05
RFX3P48380 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.26□□□□□ -2.05
RFX3P48380 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.26□□□□□ -2.05
RFX3P48380 MTCO2P15-201ENST00000532655 656 ntBASIC2.26□□□□□ -2.05
RFX3P48380 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.26□□□□□ -2.05
RFX3P48380 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.26□□□□□ -2.05
RFX3P48380 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.26□□□□□ -2.05
RFX3P48380 DUXAP1-201ENST00000556632 463 ntBASIC2.26□□□□□ -2.05
RFX3P48380 AC027176.1-201ENST00000560204 514 ntBASIC2.26□□□□□ -2.05
RFX3P48380 AC023824.2-201ENST00000566185 400 ntBASIC2.26□□□□□ -2.05
RFX3P48380 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.26□□□□□ -2.05
RFX3P48380 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.26□□□□□ -2.05
RFX3P48380 AC061975.8-201ENST00000587058 721 ntBASIC2.26□□□□□ -2.05
RFX3P48380 AC004805.2-201ENST00000605382 482 ntBASIC2.26□□□□□ -2.05
RFX3P48380 AC009974.1-201ENST00000608881 455 ntBASIC2.26□□□□□ -2.05
RFX3P48380 AC004908.2-201ENST00000609090 574 ntBASIC2.26□□□□□ -2.05
RFX3P48380 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.26□□□□□ -2.05
RFX3P48380 AC022960.3-201ENST00000619794 441 ntBASIC2.26□□□□□ -2.05
RFX3P48380 AC013470.4-201ENST00000619978 986 ntBASIC2.26□□□□□ -2.05
RFX3P48380 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.25□□□□□ -2.05
RFX3P48380 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
RFX3P48380 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.25□□□□□ -2.05
RFX3P48380 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RFX3P48380 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
RFX3P48380 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RFX3P48380 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
RFX3P48380 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RFX3P48380 FAM133CP-201ENST00000332869 704 ntBASIC2.25□□□□□ -2.05
RFX3P48380 MIR449A-201ENST00000362113 91 ntBASIC2.25□□□□□ -2.05
RFX3P48380 RNU6-931P-201ENST00000363850 107 ntBASIC2.25□□□□□ -2.05
RFX3P48380 RNA5SP456-201ENST00000364002 114 ntBASIC2.25□□□□□ -2.05
RFX3P48380 RNU6-157P-201ENST00000383957 107 ntBASIC2.25□□□□□ -2.05
RFX3P48380 RNU6-723P-201ENST00000383973 107 ntBASIC2.25□□□□□ -2.05
RFX3P48380 U3.37-201ENST00000408528 213 ntBASIC2.25□□□□□ -2.05
RFX3P48380 RNU6-757P-201ENST00000410334 100 ntBASIC2.25□□□□□ -2.05
RFX3P48380 AL359704.1-201ENST00000411586 781 ntBASIC2.25□□□□□ -2.05
RFX3P48380 AC007064.1-201ENST00000412238 351 ntBASIC2.25□□□□□ -2.05
RFX3P48380 RPL17P12-201ENST00000413391 526 ntBASIC2.25□□□□□ -2.05
RFX3P48380 MTCO2P21-201ENST00000419780 677 ntBASIC2.25□□□□□ -2.05
RFX3P48380 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.25□□□□□ -2.05
RFX3P48380 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.25□□□□□ -2.05
RFX3P48380 USP12PX-201ENST00000432383 1057 ntBASIC2.25□□□□□ -2.05
RFX3P48380 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.25□□□□□ -2.05
RFX3P48380 CR769776.1-201ENST00000441254 787 ntBASIC2.25□□□□□ -2.05
RFX3P48380 RPL23AP35-201ENST00000451906 501 ntBASIC2.25□□□□□ -2.05
RFX3P48380 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.25□□□□□ -2.05
RFX3P48380 RBM43P1-201ENST00000476891 1081 ntBASIC2.25□□□□□ -2.05
RFX3P48380 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.25□□□□□ -2.05
RFX3P48380 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.25□□□□□ -2.05
RFX3P48380 MTCYBP43-201ENST00000513621 740 ntBASIC2.25□□□□□ -2.05
RFX3P48380 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.25□□□□□ -2.05
RFX3P48380 RNU4-29P-201ENST00000515943 174 ntBASIC2.25□□□□□ -2.05
RFX3P48380 RNU6-311P-201ENST00000516224 102 ntBASIC2.25□□□□□ -2.05
RFX3P48380 RNA5SP290-201ENST00000517133 127 ntBASIC2.25□□□□□ -2.05
RFX3P48380 RPL7P20-201ENST00000520308 745 ntBASIC2.25□□□□□ -2.05
RFX3P48380 AC021269.2-201ENST00000532318 330 ntBASIC2.25□□□□□ -2.05
RFX3P48380 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.25□□□□□ -2.05
RFX3P48380 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.25□□□□□ -2.05
RFX3P48380 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms