Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC128657.1-201ENST00000549459 145 ntBASIC3.92□□□□□ -1.78
COL15A1P39059 MIR4644-201ENST00000579929 84 ntBASIC3.92□□□□□ -1.78
COL15A1P39059 AC017083.3-201ENST00000609955 700 ntBASIC3.92□□□□□ -1.78
COL15A1P39059 MIR6130-201ENST00000619419 109 ntBASIC3.92□□□□□ -1.78
COL15A1P39059 U7.8-201ENST00000619968 63 ntBASIC3.92□□□□□ -1.78
COL15A1P39059 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.92□□□□□ -1.78
COL15A1P39059 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL15A1P39059 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.92□□□□□ -1.78
COL15A1P39059 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.92□□□□□ -1.78
COL15A1P39059 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL15A1P39059 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.92□□□□□ -1.78
COL15A1P39059 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
COL15A1P39059 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.92□□□□□ -1.78
COL15A1P39059 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
COL15A1P39059 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.91□□□□□ -1.78
COL15A1P39059 SNORA31-201ENST00000362607 130 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 RNY4P14-201ENST00000363656 96 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 Y_RNA.159-201ENST00000363674 87 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 Y_RNA.256-201ENST00000364594 104 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.91□□□□□ -1.78
COL15A1P39059 RNU6-1074P-201ENST00000383995 104 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 SNORA48.8-201ENST00000391324 134 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.91□□□□□ -1.78
COL15A1P39059 RPL21P66-201ENST00000426566 466 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.91□□□□□ -1.78
COL15A1P39059 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.91□□□□□ -1.78
COL15A1P39059 AC004866.2-201ENST00000438285 481 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 BNIP3P2-201ENST00000441221 577 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 AL353572.1-201ENST00000442490 417 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.91□□□□□ -1.78
COL15A1P39059 HMGN1P18-201ENST00000457642 277 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 RPS4XP22-201ENST00000480755 780 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.91□□□□□ -1.78
COL15A1P39059 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.91□□□□□ -1.78
COL15A1P39059 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.91□□□□□ -1.78
COL15A1P39059 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.91□□□□□ -1.78
COL15A1P39059 RNU7-51P-201ENST00000516560 62 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 Y_RNA.693-201ENST00000516641 110 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.91□□□□□ -1.78
COL15A1P39059 AC090572.1-201ENST00000519251 160 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.91□□□□□ -1.78
COL15A1P39059 FAM60DP-201ENST00000524174 632 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL15A1P39059 AC109635.3-201ENST00000529536 185 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 AL512310.1-201ENST00000548639 172 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 AC125611.2-201ENST00000551907 647 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 AC025678.1-201ENST00000567861 338 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.91□□□□□ -1.78
COL15A1P39059 AC007687.1-201ENST00000602704 304 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 AP000907.4-201ENST00000604143 237 ntBASIC3.91□□□□□ -1.78
COL15A1P39059 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.91□□□□□ -1.78
COL15A1P39059 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.91□□□□□ -1.78
COL15A1P39059 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL15A1P39059 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
COL15A1P39059 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL15A1P39059 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
COL15A1P39059 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
COL15A1P39059 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL15A1P39059 MIR449A-201ENST00000362113 91 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 MIR22-201ENST00000362190 85 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 RNU6-1120P-201ENST00000362988 108 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 RNU6-1090P-201ENST00000364065 94 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 SNORA7.2-201ENST00000364446 145 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 RNU6-335P-201ENST00000364563 113 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 RN7SKP285-201ENST00000410137 318 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 RNU2-9P-201ENST00000410194 145 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 RPL21P24-201ENST00000413752 448 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 MTCO1P20-201ENST00000425366 358 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.9□□□□□ -1.78
COL15A1P39059 RPL7P54-201ENST00000438336 674 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 AC105272.1-201ENST00000438604 198 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 RBMX2P4-201ENST00000441256 376 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.9□□□□□ -1.78
COL15A1P39059 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.9□□□□□ -1.78
COL15A1P39059 AC117440.1-201ENST00000474107 571 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 RNU6-237P-201ENST00000515985 71 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 SCARNA24.1-201ENST00000516465 137 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 AK6P1-201ENST00000540219 478 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.9□□□□□ -1.78
COL15A1P39059 AL157687.1-201ENST00000554853 619 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 AC012182.1-201ENST00000570133 895 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
COL15A1P39059 AC105224.1-201ENST00000587055 421 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 GLUD1P4-201ENST00000590914 418 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 AP001596.2-201ENST00000608410 312 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.9□□□□□ -1.78
COL15A1P39059 AC103710.2-201ENST00000609912 942 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 FRG1KP-201ENST00000623592 341 ntBASIC3.9□□□□□ -1.78
COL15A1P39059 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL15A1P39059 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL15A1P39059 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
COL15A1P39059 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
COL15A1P39059 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.9□□□□□ -1.79
COL15A1P39059 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
COL15A1P39059 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.9□□□□□ -1.79
COL15A1P39059 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.9□□□□□ -1.79
COL15A1P39059 MIR607-201ENST00000385241 96 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AMD1P2-201ENST00000412936 992 ntBASIC3.89□□□□□ -1.79
COL15A1P39059 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.89□□□□□ -1.79
COL15A1P39059 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms